6 items (Strongyloides ratti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A090L7P9	Protein unc-79 homolog. (2322 aa)
	A0A090LEN0	Narrow abdomen. (2052 aa)
	A0A090LES5	Tetratricopeptide repeat protein 21B. (1316 aa)
	A0A090LFH4	Protein unc-80 homolog. (479 aa)
	A0A090LME8	Uncharacterized protein. (796 aa)
	A0A090LN24	Uncharacterized protein. (542 aa)

Your Current Organism:

Strongyloides ratti

NCBI taxonomy Id: 34506
Other names: S. ratti

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A090L7P9	A0A090LEN0	Protein unc-79 homolog.	Narrow abdomen.	0.999
A0A090L7P9	A0A090LES5	Protein unc-79 homolog.	Tetratricopeptide repeat protein 21B.	0.999
A0A090L7P9	A0A090LFH4	Protein unc-79 homolog.	Protein unc-80 homolog.	0.997
A0A090L7P9	A0A090LME8	Protein unc-79 homolog.	Uncharacterized protein.	0.982
A0A090L7P9	A0A090LN24	Protein unc-79 homolog.	Uncharacterized protein.	0.997
A0A090LEN0	A0A090L7P9	Narrow abdomen.	Protein unc-79 homolog.	0.999
A0A090LEN0	A0A090LFH4	Narrow abdomen.	Protein unc-80 homolog.	0.958
A0A090LEN0	A0A090LME8	Narrow abdomen.	Uncharacterized protein.	0.763
A0A090LEN0	A0A090LN24	Narrow abdomen.	Uncharacterized protein.	0.649
A0A090LES5	A0A090L7P9	Tetratricopeptide repeat protein 21B.	Protein unc-79 homolog.	0.999
A0A090LES5	A0A090LFH4	Tetratricopeptide repeat protein 21B.	Protein unc-80 homolog.	0.559
A0A090LES5	A0A090LME8	Tetratricopeptide repeat protein 21B.	Uncharacterized protein.	0.559
A0A090LES5	A0A090LN24	Tetratricopeptide repeat protein 21B.	Uncharacterized protein.	0.648
A0A090LFH4	A0A090L7P9	Protein unc-80 homolog.	Protein unc-79 homolog.	0.997
A0A090LFH4	A0A090LEN0	Protein unc-80 homolog.	Narrow abdomen.	0.958
A0A090LFH4	A0A090LES5	Protein unc-80 homolog.	Tetratricopeptide repeat protein 21B.	0.559
A0A090LFH4	A0A090LN24	Protein unc-80 homolog.	Uncharacterized protein.	0.426
A0A090LME8	A0A090L7P9	Uncharacterized protein.	Protein unc-79 homolog.	0.982
A0A090LME8	A0A090LEN0	Uncharacterized protein.	Narrow abdomen.	0.763
A0A090LME8	A0A090LES5	Uncharacterized protein.	Tetratricopeptide repeat protein 21B.	0.559