53 items (Strongyloides ratti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A090KX26	FI03683p. (681 aa)
	A0A090KZH6	Uncharacterized protein. (117 aa)
	A0A090L0L6	ATP-dependent RNA helicase WM6. (425 aa)
	A0A090L155	annotation not available (381 aa)
	A0A090L1M6	Nuclear RNA export factor 2. (543 aa)
	A0A090L275	FI21236p1. (430 aa)
	A0A090L2U1	annotation not available (324 aa)
	A0A090L3S7	Serine/arginine repetitive matrix protein 1. (388 aa)
	A0A090L5C6	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (521 aa)
	A0A090L693	annotation not available (539 aa)
	A0A090L6R4	annotation not available (856 aa)
	A0A090L6W8	Transformer-2 sex-determining protein. (279 aa)
	A0A090L7N4	CIP29 protein. (262 aa)
	A0A090L7Z4	IP17311p. (493 aa)
	A0A090L861	Serine/arginine-rich splicing factor 3. (166 aa)
	A0A090L879	LD29830p. (351 aa)
	A0A090L974	RNA recognition motif domain and Nucleotide-binding, alpha-beta plait domain-containing protein. (272 aa)
	A0A090L9D0	Partner of Y14 and mago. (172 aa)
	A0A090L9N9	RNA-binding protein with serine-rich domain 1. (248 aa)
	A0A090LAD1	Heterogeneous nuclear ribonucleoprotein K. (534 aa)
	A0A090LAM0	RNA recognition motif domain and Nucleotide-binding, alpha-beta plait domain-containing protein. (206 aa)
	A0A090LB46	annotation not available (679 aa)
	A0A090LC58	Nuclear RNA export factor 2. (611 aa)
	A0A090LCU1	Transformer-2 sex-determining protein. (234 aa)
	A0A090LD17	Nucleotide-binding, alpha-beta plait domain-containing protein. (132 aa)
	A0A090LD19	Serine/arginine-rich splicing factor 1. (295 aa)
	A0A090LF45	Histone deacetylase complex subunit SAP18. (193 aa)
	A0A090LFB7	annotation not available (598 aa)
	A0A090LFC1	Nuclear pore glycoprotein p62. (760 aa)
	A0A090LGG2	THO complex subunit 2. (1737 aa)
	A0A090LGK6	Transformer-2 sex-determining protein. (215 aa)
	A0A090LH87	THO complex subunit 4. (251 aa)
	A0A090LHZ8	Uncharacterized protein. (550 aa)
	A0A090LJ07	Uncharacterized protein. (862 aa)
	A0A090LJ15	Nuclear RNA export factor 2. (624 aa)
	A0A090LJ92	SRA stem-loop-interacting RNA-binding protein, mitochondrial. (114 aa)
	A0A090LJM1	Protein mago nashi. (149 aa)
	A0A090LKJ8	Polyadenylate-binding protein 2. (198 aa)
	A0A090LMV3	Ypsilon schachtel. (255 aa)
	A0A090LNJ4	annotation not available (352 aa)
	A0A090LNN7	SC35. (238 aa)
	A0A090LQR0	Ypsilon schachtel. (230 aa)
	A0A090MUW8	Uncharacterized protein. (972 aa)
	A0A090MV32	TAR DNA-binding protein 43. (410 aa)
	A0A090MVE4	Glorund. (489 aa)
	A0A090MVH2	Uncharacterized protein. (339 aa)
	A0A090MX03	RNA recognition motif domain and Nucleotide-binding, alpha-beta plait domain-containing protein. (207 aa)
	A0A090MXL9	Btz domain-containing protein. (426 aa)
	A0A090MXT0	Nuclear transport factor 2, eukaryote domain-containing protein. (132 aa)
	A0A090MY02	Splicing factor U2AF 35 kDa subunit. (234 aa)
	A0A090MZF7	Hephaestus. (672 aa)
	A0A090MZZ4	RNA recognition motif domain and Nucleotide-binding, alpha-beta plait domain-containing protein. (448 aa)
	A0A090N009	Regulator of nonsense transcripts 1. (836 aa)

Your Current Organism:

Strongyloides ratti

NCBI taxonomy Id: 34506
Other names: S. ratti

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A090KX26	A0A090L0L6	FI03683p.	ATP-dependent RNA helicase WM6.	0.676
A0A090KX26	A0A090L275	FI03683p.	FI21236p1.	0.725
A0A090KX26	A0A090L2U1	FI03683p.	annotation not available	0.856
A0A090KX26	A0A090L5C6	FI03683p.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.459
A0A090KX26	A0A090L693	FI03683p.	annotation not available	0.761
A0A090KX26	A0A090L6W8	FI03683p.	Transformer-2 sex-determining protein.	0.746
A0A090KX26	A0A090L7Z4	FI03683p.	IP17311p.	0.829
A0A090KX26	A0A090L861	FI03683p.	Serine/arginine-rich splicing factor 3.	0.793
A0A090KX26	A0A090L879	FI03683p.	LD29830p.	0.713
A0A090KX26	A0A090L974	FI03683p.	RNA recognition motif domain and Nucleotide-binding, alpha-beta plait domain-containing protein.	0.649
A0A090KX26	A0A090LAD1	FI03683p.	Heterogeneous nuclear ribonucleoprotein K.	0.878
A0A090KX26	A0A090LAM0	FI03683p.	RNA recognition motif domain and Nucleotide-binding, alpha-beta plait domain-containing protein.	0.725
A0A090KX26	A0A090LCU1	FI03683p.	Transformer-2 sex-determining protein.	0.722
A0A090KX26	A0A090LD19	FI03683p.	Serine/arginine-rich splicing factor 1.	0.752
A0A090KX26	A0A090LFB7	FI03683p.	annotation not available	0.812
A0A090KX26	A0A090LGK6	FI03683p.	Transformer-2 sex-determining protein.	0.790
A0A090KX26	A0A090LH87	FI03683p.	THO complex subunit 4.	0.412
A0A090KX26	A0A090LHZ8	FI03683p.	Uncharacterized protein.	0.747
A0A090KX26	A0A090LJ07	FI03683p.	Uncharacterized protein.	0.421
A0A090KX26	A0A090LJ92	FI03683p.	SRA stem-loop-interacting RNA-binding protein, mitochondrial.	0.722