27 items (Strongyloides ratti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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protein homology

Your Input:
	A0A090L2Z9	annotation not available (1016 aa)
	A0A090L784	Serine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family. (2555 aa)
	A0A090L9A7	Double-strand break repair protein MRE11A; Belongs to the MRE11/RAD32 family. (541 aa)
	A0A090L9I6	RMI1_N domain-containing protein. (593 aa)
	A0A090L9X2	Bloom syndrome protein. (1034 aa)
	A0A090LA04	Bloom syndrome protein. (1520 aa)
	A0A090LA91	DNA topoisomerase 2-binding protein 1. (891 aa)
	A0A090LCN1	DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (781 aa)
	A0A090LD70	BRCT domain and Ankyrin repeat and Ankyrin repeat-containing domain-containing protein. (897 aa)
	A0A090LDJ2	DNA repair protein RAD50. (1309 aa)
	A0A090LDS3	DNA replication ATP-dependent helicase/nuclease DNA2. (1032 aa)
	A0A090LDT3	MADF domain-containing protein. (388 aa)
	A0A090LEI3	RMI1_N domain-containing protein. (491 aa)
	A0A090LGQ8	DNA repair protein Sae2/CtIP family-containing protein. (320 aa)
	A0A090LHS8	Uncharacterized protein. (647 aa)
	A0A090LJZ0	DNA repair protein Rad51 homolog; Belongs to the RecA family. (333 aa)
	A0A090LL18	DNA repair protein RAD50. (1254 aa)
	A0A090LL80	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (784 aa)
	A0A090LMM2	DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (843 aa)
	A0A090LNA9	RE01471p. (334 aa)
	A0A090LTH3	Uncharacterized protein. (508 aa)
	A0A090MV84	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (771 aa)
	A0A090MVC4	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (600 aa)
	A0A090MWV8	annotation not available (263 aa)
	A0A090MX02	Uncharacterized protein. (212 aa)
	A0A090MYR9	RMI1_N domain-containing protein. (847 aa)
	A0A090MYX3	Replication protein A 70 kDa DNA-binding subunit. (609 aa)

Your Current Organism:

Strongyloides ratti

NCBI taxonomy Id: 34506
Other names: S. ratti

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A090L2Z9	A0A090L784	annotation not available	Serine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family.	0.766
A0A090L2Z9	A0A090L9I6	annotation not available	RMI1_N domain-containing protein.	0.683
A0A090L2Z9	A0A090L9X2	annotation not available	Bloom syndrome protein.	0.713
A0A090L2Z9	A0A090LA04	annotation not available	Bloom syndrome protein.	0.713
A0A090L2Z9	A0A090LCN1	annotation not available	DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.	0.872
A0A090L2Z9	A0A090LDS3	annotation not available	DNA replication ATP-dependent helicase/nuclease DNA2.	0.469
A0A090L2Z9	A0A090LEI3	annotation not available	RMI1_N domain-containing protein.	0.683
A0A090L2Z9	A0A090LJZ0	annotation not available	DNA repair protein Rad51 homolog; Belongs to the RecA family.	0.573
A0A090L2Z9	A0A090LL80	annotation not available	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.617
A0A090L2Z9	A0A090LMM2	annotation not available	DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.	0.838
A0A090L2Z9	A0A090LNA9	annotation not available	RE01471p.	0.683
A0A090L2Z9	A0A090MV84	annotation not available	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.713
A0A090L2Z9	A0A090MVC4	annotation not available	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.617
A0A090L2Z9	A0A090MWV8	annotation not available	annotation not available	0.742
A0A090L2Z9	A0A090MX02	annotation not available	Uncharacterized protein.	0.713
A0A090L2Z9	A0A090MYR9	annotation not available	RMI1_N domain-containing protein.	0.683
A0A090L2Z9	A0A090MYX3	annotation not available	Replication protein A 70 kDa DNA-binding subunit.	0.864
A0A090L784	A0A090L2Z9	Serine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family.	annotation not available	0.766
A0A090L784	A0A090L9A7	Serine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family.	Double-strand break repair protein MRE11A; Belongs to the MRE11/RAD32 family.	0.973
A0A090L784	A0A090L9I6	Serine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family.	RMI1_N domain-containing protein.	0.664