5 items (Strongyloides ratti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A090KXX7	DNA repair endonuclease XPF. (866 aa)
	A0A090L5I4	DNA excision repair protein ERCC-1. (207 aa)
	A0A090L6G6	DNA repair protein complementing XP-A cells. (128 aa)
	A0A090L753	XPG-I domain and 5'-3' exonuclease, C-terminal domain-containing protein. (501 aa)
	A0A090MY01	Crossover junction endonuclease MUS81. (462 aa)

Your Current Organism:

Strongyloides ratti

NCBI taxonomy Id: 34506
Other names: S. ratti

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A090KXX7	A0A090L5I4	DNA repair endonuclease XPF.	DNA excision repair protein ERCC-1.	0.999
A0A090KXX7	A0A090L6G6	DNA repair endonuclease XPF.	DNA repair protein complementing XP-A cells.	0.987
A0A090KXX7	A0A090L753	DNA repair endonuclease XPF.	XPG-I domain and 5'-3' exonuclease, C-terminal domain-containing protein.	0.949
A0A090KXX7	A0A090MY01	DNA repair endonuclease XPF.	Crossover junction endonuclease MUS81.	0.968
A0A090L5I4	A0A090KXX7	DNA excision repair protein ERCC-1.	DNA repair endonuclease XPF.	0.999
A0A090L5I4	A0A090L6G6	DNA excision repair protein ERCC-1.	DNA repair protein complementing XP-A cells.	0.986
A0A090L5I4	A0A090L753	DNA excision repair protein ERCC-1.	XPG-I domain and 5'-3' exonuclease, C-terminal domain-containing protein.	0.938
A0A090L5I4	A0A090MY01	DNA excision repair protein ERCC-1.	Crossover junction endonuclease MUS81.	0.989
A0A090L6G6	A0A090KXX7	DNA repair protein complementing XP-A cells.	DNA repair endonuclease XPF.	0.987
A0A090L6G6	A0A090L5I4	DNA repair protein complementing XP-A cells.	DNA excision repair protein ERCC-1.	0.986
A0A090L6G6	A0A090L753	DNA repair protein complementing XP-A cells.	XPG-I domain and 5'-3' exonuclease, C-terminal domain-containing protein.	0.957
A0A090L6G6	A0A090MY01	DNA repair protein complementing XP-A cells.	Crossover junction endonuclease MUS81.	0.945
A0A090L753	A0A090KXX7	XPG-I domain and 5'-3' exonuclease, C-terminal domain-containing protein.	DNA repair endonuclease XPF.	0.949
A0A090L753	A0A090L5I4	XPG-I domain and 5'-3' exonuclease, C-terminal domain-containing protein.	DNA excision repair protein ERCC-1.	0.938
A0A090L753	A0A090L6G6	XPG-I domain and 5'-3' exonuclease, C-terminal domain-containing protein.	DNA repair protein complementing XP-A cells.	0.957
A0A090L753	A0A090MY01	XPG-I domain and 5'-3' exonuclease, C-terminal domain-containing protein.	Crossover junction endonuclease MUS81.	0.959
A0A090MY01	A0A090KXX7	Crossover junction endonuclease MUS81.	DNA repair endonuclease XPF.	0.968
A0A090MY01	A0A090L5I4	Crossover junction endonuclease MUS81.	DNA excision repair protein ERCC-1.	0.989
A0A090MY01	A0A090L6G6	Crossover junction endonuclease MUS81.	DNA repair protein complementing XP-A cells.	0.945
A0A090MY01	A0A090L753	Crossover junction endonuclease MUS81.	XPG-I domain and 5'-3' exonuclease, C-terminal domain-containing protein.	0.959