51 items (Strongyloides ratti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A090KWG7	Protein stoned-B. (1573 aa)
	A0A090L1Y4	AP-1 complex subunit gamma. (832 aa)
	A0A090L2B5	Uncharacterized protein. (215 aa)
	A0A090L2Z1	AP-3 complex subunit mu-2; Belongs to the adaptor complexes medium subunit family. (414 aa)
	A0A090L306	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (160 aa)
	A0A090L3Q9	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1692 aa)
	A0A090L4G3	Zinc finger, RING-CH-type domain and Zinc finger, RING/FYVE/PHD-type domain-containing protein. (209 aa)
	A0A090L4Y9	SH3 domain and BAR domain and Arfaptin homology (AH) domain/BAR domain-containing protein. (392 aa)
	A0A090L5F6	Dynamin; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (829 aa)
	A0A090L5U4	FUN14 family-containing protein. (146 aa)
	A0A090L649	Reps. (582 aa)
	A0A090L6M9	Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering. (151 aa)
	A0A090L761	Adaptor protein complex AP-3 small chain sigma3. (192 aa)
	A0A090L9L4	Uncharacterized protein. (216 aa)
	A0A090LAG6	Phosphatidylinositol-binding clathrin assembly protein. (899 aa)
	A0A090LBD8	Uncharacterized protein. (1040 aa)
	A0A090LBJ4	Dynamin-1-like protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (689 aa)
	A0A090LBQ9	Uncharacterized protein. (475 aa)
	A0A090LDB1	Uncharacterized protein. (1091 aa)
	A0A090LDD7	annotation not available (684 aa)
	A0A090LDP6	ATP-dependent RNA helicase DHX29. (1516 aa)
	A0A090LF27	Zinc finger, C6HC-type domain and E3 ubiquitin-protein ligase parkin family-containing protein. (381 aa)
	A0A090LFE5	Uncharacterized protein. (631 aa)
	A0A090LFG4	Belongs to the adaptor complexes medium subunit family. (424 aa)
	A0A090LGC6	EPS15 homology (EH) domain and EF-hand domain pair-containing protein. (353 aa)
	A0A090LGK3	Huntingtin interacting protein 1. (915 aa)
	A0A090LH60	DUF148 domain-containing protein. (170 aa)
	A0A090LHM6	AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family. (943 aa)
	A0A090LIF1	Serine/threonine-protein phosphatase PGAM5, mitochondrial. (280 aa)
	A0A090LIY0	Uncharacterized protein. (613 aa)
	A0A090LJP3	AP complex subunit beta; Belongs to the adaptor complexes large subunit family. (638 aa)
	A0A090LJU6	Belongs to the adaptor complexes medium subunit family. (430 aa)
	A0A090LK51	AP-47; Belongs to the adaptor complexes medium subunit family. (479 aa)
	A0A090LKE0	Clathrin heavy chain. (946 aa)
	A0A090LLE4	AP complex subunit beta. (964 aa)
	A0A090LLG6	Dynamin-like 120 kDa protein, mitochondrial; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (921 aa)
	A0A090LMG3	Garnet. (1161 aa)
	A0A090LML1	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (939 aa)
	A0A090LN99	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (229 aa)
	A0A090LT99	Uncharacterized protein. (105 aa)
	A0A090LUT6	Clathrin interactor 1. (490 aa)
	A0A090MWT9	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (142 aa)
	A0A090MYD9	Transmembrane GTPase fzo; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (745 aa)
	A0A090MYG1	Drab5. (331 aa)
	A0A090MZ72	AP-47; Belongs to the adaptor complexes medium subunit family. (383 aa)
	A0A090MZF4	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (145 aa)
	A0A090MZK0	Drongo. (465 aa)
	A0A090N082	Numb-associated kinase. (1127 aa)
	A0A090N0L1	EF-hand domain and EF-hand domain pair-containing protein. (479 aa)
	A0A090N0N0	NECAP-like protein CG9132. (188 aa)
	A0A090N0X5	AP-50; Belongs to the adaptor complexes medium subunit family. (416 aa)

Your Current Organism:

Strongyloides ratti

NCBI taxonomy Id: 34506
Other names: S. ratti

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A090KWG7	A0A090L1Y4	Protein stoned-B.	AP-1 complex subunit gamma.	0.598
A0A090KWG7	A0A090L3Q9	Protein stoned-B.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.688
A0A090KWG7	A0A090L4Y9	Protein stoned-B.	SH3 domain and BAR domain and Arfaptin homology (AH) domain/BAR domain-containing protein.	0.729
A0A090KWG7	A0A090L649	Protein stoned-B.	Reps.	0.757
A0A090KWG7	A0A090LAG6	Protein stoned-B.	Phosphatidylinositol-binding clathrin assembly protein.	0.836
A0A090KWG7	A0A090LBQ9	Protein stoned-B.	Uncharacterized protein.	0.806
A0A090KWG7	A0A090LDB1	Protein stoned-B.	Uncharacterized protein.	0.638
A0A090KWG7	A0A090LGC6	Protein stoned-B.	EPS15 homology (EH) domain and EF-hand domain pair-containing protein.	0.806
A0A090KWG7	A0A090LH60	Protein stoned-B.	DUF148 domain-containing protein.	0.638
A0A090KWG7	A0A090LIY0	Protein stoned-B.	Uncharacterized protein.	0.806
A0A090KWG7	A0A090LJP3	Protein stoned-B.	AP complex subunit beta; Belongs to the adaptor complexes large subunit family.	0.731
A0A090KWG7	A0A090LKE0	Protein stoned-B.	Clathrin heavy chain.	0.688
A0A090KWG7	A0A090LLE4	Protein stoned-B.	AP complex subunit beta.	0.731
A0A090KWG7	A0A090LMG3	Protein stoned-B.	Garnet.	0.598
A0A090KWG7	A0A090LML1	Protein stoned-B.	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.735
A0A090KWG7	A0A090LN99	Protein stoned-B.	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	0.732
A0A090KWG7	A0A090LUT6	Protein stoned-B.	Clathrin interactor 1.	0.446
A0A090KWG7	A0A090MWT9	Protein stoned-B.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.830
A0A090KWG7	A0A090MZK0	Protein stoned-B.	Drongo.	0.727
A0A090KWG7	A0A090N082	Protein stoned-B.	Numb-associated kinase.	0.498