25 items (Strongyloides ratti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A090L6E6	Protein quaking. (397 aa)
	A0A090L672	RNA-binding protein 25. (606 aa)
	A0A090L5D4	RNA recognition motif domain and Nucleotide-binding, alpha-beta plait domain-containing protein. (324 aa)
	A0A090L4I7	BcDNA.GH11110. (631 aa)
	A0A090L405	Bruno-3. (666 aa)
	A0A090L1W7	annotation not available (464 aa)
	A0A090L1N8	Fragile X mental retardation syndrome-related protein 1. (515 aa)
	A0A090KZS9	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (165 aa)
	A0A090N0J0	Ataxin-2 binding protein 1. (497 aa)
	A0A090N0I1	annotation not available (432 aa)
	A0A090MYQ2	RNA recognition motif domain and Nucleotide-binding, alpha-beta plait domain-containing protein. (148 aa)
	A0A090MX03	RNA recognition motif domain and Nucleotide-binding, alpha-beta plait domain-containing protein. (207 aa)
	A0A090MVL7	LD35640p. (603 aa)
	A0A090LNN7	SC35. (238 aa)
	A0A090LIV0	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (165 aa)
	A0A090LEY5	Microfibrillar-associated protein 1. (435 aa)
	A0A090LER6	K Homology domain-containing protein. (437 aa)
	A0A090LAN5	Protein quaking. (395 aa)
	A0A090KY69	Pasilla. (384 aa)
	A0A090KX31	Protein muscleblind. (377 aa)
	A0A090LAM0	RNA recognition motif domain and Nucleotide-binding, alpha-beta plait domain-containing protein. (206 aa)
	A0A090L9P7	Poly(U)-binding-splicing factor PUF60. (657 aa)
	A0A090L8T1	K Homology domain, type 1-containing protein. (203 aa)
	A0A090L8Z4	Protein Red. (385 aa)
	A0A090L7R2	Zinc finger, CCCH-type domain-containing protein. (290 aa)

Your Current Organism:

Strongyloides ratti

NCBI taxonomy Id: 34506
Other names: S. ratti

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A090KX31	A0A090L405	Protein muscleblind.	Bruno-3.	0.475
A0A090KX31	A0A090N0J0	Protein muscleblind.	Ataxin-2 binding protein 1.	0.429
A0A090KY69	A0A090N0J0	Pasilla.	Ataxin-2 binding protein 1.	0.530
A0A090L1W7	A0A090L672	annotation not available	RNA-binding protein 25.	0.725
A0A090L1W7	A0A090L8Z4	annotation not available	Protein Red.	0.998
A0A090L1W7	A0A090LEY5	annotation not available	Microfibrillar-associated protein 1.	0.977
A0A090L405	A0A090KX31	Bruno-3.	Protein muscleblind.	0.475
A0A090L405	A0A090L5D4	Bruno-3.	RNA recognition motif domain and Nucleotide-binding, alpha-beta plait domain-containing protein.	0.516
A0A090L405	A0A090N0J0	Bruno-3.	Ataxin-2 binding protein 1.	0.539
A0A090L5D4	A0A090L405	RNA recognition motif domain and Nucleotide-binding, alpha-beta plait domain-containing protein.	Bruno-3.	0.516
A0A090L5D4	A0A090N0I1	RNA recognition motif domain and Nucleotide-binding, alpha-beta plait domain-containing protein.	annotation not available	0.727
A0A090L5D4	A0A090N0J0	RNA recognition motif domain and Nucleotide-binding, alpha-beta plait domain-containing protein.	Ataxin-2 binding protein 1.	0.869
A0A090L672	A0A090L1W7	RNA-binding protein 25.	annotation not available	0.725
A0A090L672	A0A090L8Z4	RNA-binding protein 25.	Protein Red.	0.645
A0A090L672	A0A090L9P7	RNA-binding protein 25.	Poly(U)-binding-splicing factor PUF60.	0.495
A0A090L672	A0A090LEY5	RNA-binding protein 25.	Microfibrillar-associated protein 1.	0.532
A0A090L672	A0A090MYQ2	RNA-binding protein 25.	RNA recognition motif domain and Nucleotide-binding, alpha-beta plait domain-containing protein.	0.698
A0A090L6E6	A0A090MVL7	Protein quaking.	LD35640p.	0.510
A0A090L6E6	A0A090N0J0	Protein quaking.	Ataxin-2 binding protein 1.	0.462
A0A090L8T1	A0A090MVL7	K Homology domain, type 1-containing protein.	LD35640p.	0.510