19 items (Strongyloides ratti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A090MYR9	RMI1_N domain-containing protein. (847 aa)
	A0A090KXX7	DNA repair endonuclease XPF. (866 aa)
	A0A090KYR3	Bloom syndrome protein. (735 aa)
	A0A090L7L1	Mutagen-sensitive 301. (854 aa)
	A0A090L8M4	Uncharacterized protein. (427 aa)
	A0A090L9I6	RMI1_N domain-containing protein. (593 aa)
	A0A090L9X2	Bloom syndrome protein. (1034 aa)
	A0A090LA04	Bloom syndrome protein. (1520 aa)
	A0A090LC06	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1107 aa)
	A0A090LEI3	RMI1_N domain-containing protein. (491 aa)
	A0A090LFJ6	MutS protein homolog 4. (840 aa)
	A0A090LG13	annotation not available (437 aa)
	A0A090LG25	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1406 aa)
	A0A090LHV2	UDP-N-acetylglucosamine transporter. (339 aa)
	A0A090LN96	Mutagen-sensitive 301. (797 aa)
	A0A090MV84	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (771 aa)
	A0A090MX02	Uncharacterized protein. (212 aa)
	A0A090MXK7	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1414 aa)
	A0A090MY01	Crossover junction endonuclease MUS81. (462 aa)

Your Current Organism:

Strongyloides ratti

NCBI taxonomy Id: 34506
Other names: S. ratti

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A090KXX7	A0A090KYR3	DNA repair endonuclease XPF.	Bloom syndrome protein.	0.885
A0A090KXX7	A0A090L7L1	DNA repair endonuclease XPF.	Mutagen-sensitive 301.	0.697
A0A090KXX7	A0A090L9I6	DNA repair endonuclease XPF.	RMI1_N domain-containing protein.	0.863
A0A090KXX7	A0A090L9X2	DNA repair endonuclease XPF.	Bloom syndrome protein.	0.885
A0A090KXX7	A0A090LA04	DNA repair endonuclease XPF.	Bloom syndrome protein.	0.885
A0A090KXX7	A0A090LEI3	DNA repair endonuclease XPF.	RMI1_N domain-containing protein.	0.863
A0A090KXX7	A0A090LFJ6	DNA repair endonuclease XPF.	MutS protein homolog 4.	0.718
A0A090KXX7	A0A090LN96	DNA repair endonuclease XPF.	Mutagen-sensitive 301.	0.697
A0A090KXX7	A0A090MV84	DNA repair endonuclease XPF.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.885
A0A090KXX7	A0A090MX02	DNA repair endonuclease XPF.	Uncharacterized protein.	0.885
A0A090KXX7	A0A090MY01	DNA repair endonuclease XPF.	Crossover junction endonuclease MUS81.	0.968
A0A090KXX7	A0A090MYR9	DNA repair endonuclease XPF.	RMI1_N domain-containing protein.	0.863
A0A090KYR3	A0A090KXX7	Bloom syndrome protein.	DNA repair endonuclease XPF.	0.885
A0A090KYR3	A0A090L9I6	Bloom syndrome protein.	RMI1_N domain-containing protein.	0.800
A0A090KYR3	A0A090LC06	Bloom syndrome protein.	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	0.522
A0A090KYR3	A0A090LEI3	Bloom syndrome protein.	RMI1_N domain-containing protein.	0.800
A0A090KYR3	A0A090LFJ6	Bloom syndrome protein.	MutS protein homolog 4.	0.739
A0A090KYR3	A0A090LG25	Bloom syndrome protein.	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	0.522
A0A090KYR3	A0A090MXK7	Bloom syndrome protein.	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	0.522
A0A090KYR3	A0A090MY01	Bloom syndrome protein.	Crossover junction endonuclease MUS81.	0.871