32 items (Strongyloides ratti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:
	A0A090L405	Bruno-3. (666 aa)
	A0A090N0I1	annotation not available (432 aa)
	A0A090MZJ9	Zinc finger, CCHC-type domain-containing protein. (431 aa)
	A0A090MZE9	P-loop containing Nucleoside triphosphate hydrolase domain-containing protein. (559 aa)
	A0A090MYQ2	RNA recognition motif domain and Nucleotide-binding, alpha-beta plait domain-containing protein. (148 aa)
	A0A090MXL3	K Homology domain and K Homology domain, type 1-containing protein. (586 aa)
	A0A090MXK8	DNA-directed RNA polymerase II subunit RPB7. (174 aa)
	A0A090MV32	TAR DNA-binding protein 43. (410 aa)
	A0A090LT82	annotation not available (437 aa)
	A0A090LNT1	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (665 aa)
	A0A090LN34	Beta-lactamase-like protein 2. (306 aa)
	A0A090LLH2	Squamous cell carcinoma antigen recognized by T-cells 3. (789 aa)
	A0A090LJ63	Double-stranded RNA-binding domain-containing protein. (348 aa)
	A0A090LJ05	PAB-dependent poly(A)-specific ribonuclease subunit PAN3. (598 aa)
	A0A090LIN3	Exosome component 10. (746 aa)
	A0A090LHH6	Protein argonaute-4; Belongs to the argonaute family. (935 aa)
	A0A090LGT5	P-loop containing Nucleoside triphosphate hydrolase domain-containing protein. (940 aa)
	A0A090LF07	Protein alan shepard. (556 aa)
	A0A090LEV7	Eukaryotic translation initiation factor 4H. (224 aa)
	A0A090LDB9	Ataxin 1. (600 aa)
	A0A090LBW3	La-related protein 1. (1117 aa)
	A0A090LB83	Protein argonaute-2; Belongs to the argonaute family. (871 aa)
	A0A090L9L7	Zinc finger RNA-binding protein. (710 aa)
	A0A090L5D4	RNA recognition motif domain and Nucleotide-binding, alpha-beta plait domain-containing protein. (324 aa)
	A0A090L5C6	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (521 aa)
	A0A090L2Z9	annotation not available (1016 aa)
	A0A090L124	Nuclear protein UKp68. (606 aa)
	A0A090KZM7	La-related protein 1. (445 aa)
	A0A090KZD4	Protein argonaute-2; Belongs to the argonaute family. (975 aa)
	A0A090KY49	RLR CTR domain-containing protein. (980 aa)
	A0A090KX83	3'-5' exonuclease domain and Ribonuclease H-like domain-containing protein. (848 aa)
	A0A090KX09	ATP-dependent RNA helicase DDX3Y; Belongs to the DEAD box helicase family. (694 aa)

Your Current Organism:

Strongyloides ratti

NCBI taxonomy Id: 34506
Other names: S. ratti

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A090KX09	A0A090KX83	ATP-dependent RNA helicase DDX3Y; Belongs to the DEAD box helicase family.	3'-5' exonuclease domain and Ribonuclease H-like domain-containing protein.	0.608
A0A090KX09	A0A090L5C6	ATP-dependent RNA helicase DDX3Y; Belongs to the DEAD box helicase family.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.646
A0A090KX09	A0A090LEV7	ATP-dependent RNA helicase DDX3Y; Belongs to the DEAD box helicase family.	Eukaryotic translation initiation factor 4H.	0.648
A0A090KX09	A0A090LIN3	ATP-dependent RNA helicase DDX3Y; Belongs to the DEAD box helicase family.	Exosome component 10.	0.608
A0A090KX09	A0A090LJ05	ATP-dependent RNA helicase DDX3Y; Belongs to the DEAD box helicase family.	PAB-dependent poly(A)-specific ribonuclease subunit PAN3.	0.484
A0A090KX09	A0A090LNT1	ATP-dependent RNA helicase DDX3Y; Belongs to the DEAD box helicase family.	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.740
A0A090KX09	A0A090MV32	ATP-dependent RNA helicase DDX3Y; Belongs to the DEAD box helicase family.	TAR DNA-binding protein 43.	0.580
A0A090KX09	A0A090MYQ2	ATP-dependent RNA helicase DDX3Y; Belongs to the DEAD box helicase family.	RNA recognition motif domain and Nucleotide-binding, alpha-beta plait domain-containing protein.	0.419
A0A090KX09	A0A090MZJ9	ATP-dependent RNA helicase DDX3Y; Belongs to the DEAD box helicase family.	Zinc finger, CCHC-type domain-containing protein.	0.419
A0A090KX83	A0A090KX09	3'-5' exonuclease domain and Ribonuclease H-like domain-containing protein.	ATP-dependent RNA helicase DDX3Y; Belongs to the DEAD box helicase family.	0.608
A0A090KX83	A0A090L124	3'-5' exonuclease domain and Ribonuclease H-like domain-containing protein.	Nuclear protein UKp68.	0.531
A0A090KX83	A0A090MYQ2	3'-5' exonuclease domain and Ribonuclease H-like domain-containing protein.	RNA recognition motif domain and Nucleotide-binding, alpha-beta plait domain-containing protein.	0.571
A0A090KX83	A0A090MZJ9	3'-5' exonuclease domain and Ribonuclease H-like domain-containing protein.	Zinc finger, CCHC-type domain-containing protein.	0.454
A0A090KY49	A0A090LJ63	RLR CTR domain-containing protein.	Double-stranded RNA-binding domain-containing protein.	0.522
A0A090KZD4	A0A090LF07	Protein argonaute-2; Belongs to the argonaute family.	Protein alan shepard.	0.442
A0A090KZD4	A0A090LHH6	Protein argonaute-2; Belongs to the argonaute family.	Protein argonaute-4; Belongs to the argonaute family.	0.627
A0A090KZD4	A0A090LJ63	Protein argonaute-2; Belongs to the argonaute family.	Double-stranded RNA-binding domain-containing protein.	0.891
A0A090KZD4	A0A090LNT1	Protein argonaute-2; Belongs to the argonaute family.	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.545
A0A090KZD4	A0A090MXK8	Protein argonaute-2; Belongs to the argonaute family.	DNA-directed RNA polymerase II subunit RPB7.	0.480
A0A090KZD4	A0A090N0I1	Protein argonaute-2; Belongs to the argonaute family.	annotation not available	0.465