37 items (Strongyloides ratti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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co-expression

protein homology

Your Input:
	A0A090MZA2	Luc7-like protein 3. (316 aa)
	A0A090MZ55	Uncharacterized protein. (345 aa)
	A0A090MYR2	U1 small nuclear ribonucleoprotein C. (87 aa)
	A0A090MXL9	Btz domain-containing protein. (426 aa)
	A0A090MXL7	Ring finger protein 113A. (153 aa)
	A0A090MX77	PRP40 pre-mRNA processing factor 40 homolog A. (731 aa)
	A0A090MWE8	Novel protein similar to human splicing factor 3a, subunit 1, 120kD. (647 aa)
	A0A090LQ93	LD21120p. (284 aa)
	A0A090LH16	HIV Tat-specific factor 1. (400 aa)
	A0A090LHQ1	Uncharacterized protein. (172 aa)
	A0A090LPU0	Splicing factor 3A subunit 2. (234 aa)
	A0A090KWR0	Splicing factor 3B subunit 6-like protein. (136 aa)
	A0A090KY87	Tuftelin-interacting protein 11. (585 aa)
	A0A090L1F5	Splicing factor 3B subunit 2. (506 aa)
	A0A090L1K1	Peptidyl-prolyl cis-trans isomerase CWC27 homolog. (304 aa)
	A0A090L1W7	annotation not available (464 aa)
	A0A090L354	Similar to Xab2 protein. (794 aa)
	A0A090L385	BUD13 homolog. (212 aa)
	A0A090L3T2	PRP19/PSO4 homolog. (488 aa)
	A0A090L5C6	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (521 aa)
	A0A090L6I9	Protein crooked neck. (672 aa)
	A0A090L765	annotation not available (1228 aa)
	A0A090L7X9	mRNA splicing factor, Cwf18 family-containing protein. (148 aa)
	A0A090L8M5	CWC16 protein family-containing protein. (258 aa)
	A0A090LAI6	annotation not available (341 aa)
	A0A090LAL7	U1 small nuclear ribonucleoprotein 70 kDa. (180 aa)
	A0A090LBD2	Pre-mRNA-splicing factor RBM22. (327 aa)
	A0A090LBF5	Tr-type G domain-containing protein. (981 aa)
	A0A090LBT2	U6 snRNA-associated Sm-like protein LSm7. (108 aa)
	A0A090LD46	Uncharacterized protein. (350 aa)
	A0A090LQ13	Uncharacterized protein. (296 aa)
	A0A090LDE1	Small nuclear ribonucleoprotein Sm D3. (128 aa)
	A0A090LEK5	Small nuclear ribonucleoprotein G. (77 aa)
	A0A090LEY5	Microfibrillar-associated protein 1. (435 aa)
	A0A090LFU9	Small nuclear ribonucleoprotein-associated protein B. (192 aa)
	LSM4	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (134 aa)
	A0A090LGT9	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (118 aa)

Your Current Organism:

Strongyloides ratti

NCBI taxonomy Id: 34506
Other names: S. ratti

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A090KWR0	A0A090L1F5	A0A090KWR0	A0A090L1F5	Splicing factor 3B subunit 6-like protein.	Splicing factor 3B subunit 2.	0.993
A0A090KWR0	A0A090L1K1	A0A090KWR0	A0A090L1K1	Splicing factor 3B subunit 6-like protein.	Peptidyl-prolyl cis-trans isomerase CWC27 homolog.	0.676
A0A090KWR0	A0A090L1W7	A0A090KWR0	A0A090L1W7	Splicing factor 3B subunit 6-like protein.	annotation not available	0.625
A0A090KWR0	A0A090L354	A0A090KWR0	A0A090L354	Splicing factor 3B subunit 6-like protein.	Similar to Xab2 protein.	0.628
A0A090KWR0	A0A090L385	A0A090KWR0	A0A090L385	Splicing factor 3B subunit 6-like protein.	BUD13 homolog.	0.600
A0A090KWR0	A0A090L3T2	A0A090KWR0	A0A090L3T2	Splicing factor 3B subunit 6-like protein.	PRP19/PSO4 homolog.	0.894
A0A090KWR0	A0A090L5C6	A0A090KWR0	A0A090L5C6	Splicing factor 3B subunit 6-like protein.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.977
A0A090KWR0	A0A090L6I9	A0A090KWR0	A0A090L6I9	Splicing factor 3B subunit 6-like protein.	Protein crooked neck.	0.607
A0A090KWR0	A0A090L765	A0A090KWR0	A0A090L765	Splicing factor 3B subunit 6-like protein.	annotation not available	0.999
A0A090KWR0	A0A090LAI6	A0A090KWR0	A0A090LAI6	Splicing factor 3B subunit 6-like protein.	annotation not available	0.673
A0A090KWR0	A0A090LAL7	A0A090KWR0	A0A090LAL7	Splicing factor 3B subunit 6-like protein.	U1 small nuclear ribonucleoprotein 70 kDa.	0.693
A0A090KWR0	A0A090LBD2	A0A090KWR0	A0A090LBD2	Splicing factor 3B subunit 6-like protein.	Pre-mRNA-splicing factor RBM22.	0.591
A0A090KWR0	A0A090LBF5	A0A090KWR0	A0A090LBF5	Splicing factor 3B subunit 6-like protein.	Tr-type G domain-containing protein.	0.755
A0A090KWR0	A0A090LBT2	A0A090KWR0	A0A090LBT2	Splicing factor 3B subunit 6-like protein.	U6 snRNA-associated Sm-like protein LSm7.	0.735
A0A090KWR0	A0A090LDE1	A0A090KWR0	A0A090LDE1	Splicing factor 3B subunit 6-like protein.	Small nuclear ribonucleoprotein Sm D3.	0.931
A0A090KWR0	A0A090LEK5	A0A090KWR0	A0A090LEK5	Splicing factor 3B subunit 6-like protein.	Small nuclear ribonucleoprotein G.	0.974
A0A090KWR0	A0A090LEY5	A0A090KWR0	A0A090LEY5	Splicing factor 3B subunit 6-like protein.	Microfibrillar-associated protein 1.	0.988
A0A090KWR0	A0A090LFU9	A0A090KWR0	A0A090LFU9	Splicing factor 3B subunit 6-like protein.	Small nuclear ribonucleoprotein-associated protein B.	0.833
A0A090KWR0	A0A090LGT9	A0A090KWR0	A0A090LGT9	Splicing factor 3B subunit 6-like protein.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.944
A0A090KWR0	A0A090LH16	A0A090KWR0	A0A090LH16	Splicing factor 3B subunit 6-like protein.	HIV Tat-specific factor 1.	0.776