STRINGSTRING
A0A090LBK1 A0A090LBK1 A0A090L858 A0A090L858 A0A090LDW9 A0A090LDW9 A0A090LEI9 A0A090LEI9 A0A090LH56 A0A090LH56 A0A090LKN8 A0A090LKN8 A0A090LPZ3 A0A090LPZ3 A0A090LRI9 A0A090LRI9 A0A090MW43 A0A090MW43 A0A090MXF9 A0A090MXF9 A0A090LCW0 A0A090LCW0 A0A090MYF6 A0A090MYF6 A0A090MYQ9 A0A090MYQ9 A0A090MZI2 A0A090MZI2 A0A090KZL5 A0A090KZL5 A0A090LBV4 A0A090LBV4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A090LBK1Suppressor of Ty 6 homolog; May regulate transcriptional elongation by RNA polymerase II. (1506 aa)
A0A090L858Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (78 aa)
A0A090LDW9Transcription elongation factor B polypeptide 2. (120 aa)
A0A090LEI9Transcription elongation factor SPT5. (763 aa)
A0A090LH56annotation not available (624 aa)
A0A090LKN8DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (152 aa)
A0A090LPZ3Transcription elongation factor B polypeptide 3. (417 aa)
A0A090LRI9Uncharacterized protein. (571 aa)
A0A090MW43RNA polymerase-associated protein RTF1 homolog. (550 aa)
A0A090MXF9Uncharacterized protein. (292 aa)
A0A090LCW0RNA polymerase-associated protein LEO1. (413 aa)
A0A090MYF6Transcription elongation factor SPT5. (1076 aa)
A0A090MYQ9FACT complex subunit SPT16. (1034 aa)
A0A090MZI2Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] (99 aa)
A0A090KZL5Parafibromin. (556 aa)
A0A090LBV4annotation not available (470 aa)
Your Current Organism:
Strongyloides ratti
NCBI taxonomy Id: 34506
Other names: S. ratti
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