(53 nodes) Positive regulation of organelle organization network (Strongyloides ratti)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A090LEF5	Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy. (660 aa)
	A0A090LG88	Cell division cycle protein 16 homolog. (678 aa)
	A0A090LGH1	PDZ domain and Zinc finger, LIM-type domain-containing protein. (1088 aa)
	A0A090LGJ6	Nipped-B protein. (1394 aa)
	A0A090LH34	G2/mitotic-specific cyclin-B3; Belongs to the cyclin family. (450 aa)
	A0A090LHA9	Poly(A) RNA polymerase GLD2. (1182 aa)
	A0A090LIF1	Serine/threonine-protein phosphatase PGAM5, mitochondrial. (280 aa)
	A0A090LIY7	GH23568p. (383 aa)
	A0A090LJ05	PAB-dependent poly(A)-specific ribonuclease subunit PAN3. (598 aa)
	A0A090MZ58	Integrin-linked protein kinase. (469 aa)
	A0A090MZ41	Calpain-2 catalytic subunit; Belongs to the peptidase C2 family. (830 aa)
	A0A090MYP0	Poly(A) RNA polymerase GLD2. (526 aa)
	A0A090MXY2	Cell division cycle protein 23 homolog. (608 aa)
	A0A090MXJ5	Ubiquitin carboxyl-terminal hydrolase 32; Belongs to the peptidase C19 family. (974 aa)
	A0A090MWY5	Kalirin. (1671 aa)
	A0A090MUZ3	LIM domain-containing protein. (355 aa)
	A0A090LQB0	Uncharacterized protein. (2070 aa)
	A0A090LQ53	WD40-repeat-containing domain-containing protein. (2118 aa)
	A0A090LPP4	Actin-depolymerising factor homology domain-containing protein; Belongs to the actin-binding proteins ADF family. (164 aa)
	A0A090LPE1	WH2 domain and Formin, FH2 domain-containing protein. (882 aa)
	A0A090LP37	Uncharacterized protein. (2305 aa)
	A0A090LNS4	Uncharacterized protein. (2310 aa)
	A0A090LLX1	Nipped-B protein. (2177 aa)
	A0A090LLE7	Tetratricopeptide repeat protein 8. (511 aa)
	A0A090LL55	Intraflagellar transport protein 140 homolog. (1031 aa)
	A0A090LKV3	Delphilin. (1076 aa)
	A0A090LJZ4	annotation not available (829 aa)
	A0A090LJ42	Uncharacterized protein. (338 aa)
	A0A090LCJ6	Granulins. (491 aa)
	A0A090KZR3	Girdin. (1501 aa)
	A0A090L2B5	Uncharacterized protein. (215 aa)
	A0A090L477	Girdin. (252 aa)
	A0A090L4E4	Fermitin family homolog 1. (704 aa)
	A0A090L522	Integrin alpha-PS2; Belongs to the integrin alpha chain family. (1109 aa)
	A0A090L5T1	Transmembrane anterior posterior transformation protein 1 homolog. (538 aa)
	A0A090L6C1	Striated muscle preferentially expressed protein kinase. (619 aa)
	A0A090L6X6	Ubiquitin carboxyl-terminal hydrolase 32; Belongs to the peptidase C19 family. (986 aa)
	A0A090L7X0	MIP02973p. (519 aa)
	A0A090L846	Hemicentin-1. (5391 aa)
	A0A090L894	WASp. (434 aa)
	A0A090L8E5	Dreadlocks. (386 aa)
	A0A090L8H9	Rab3 GTPase-activating protein catalytic subunit. (884 aa)
	A0A090L9L6	Integrin beta; Belongs to the integrin beta chain family. (811 aa)
	A0A090L9Z1	AT07979p1. (239 aa)
	A0A090LA24	Ataxin-2 homolog. (1125 aa)
	A0A090LBF2	Armadillo-like helical domain and Armadillo-type fold domain-containing protein. (751 aa)
	A0A090LBS7	Paramyosin, long form. (881 aa)
	A0A090LBW5	Alpha-ketoglutarate-dependent dioxygenase alkB homolog 4. (292 aa)
	A0A090N0N2	Uncharacterized protein. (1301 aa)
	A0A090MZV0	Actin-depolymerising factor homology domain-containing protein; Belongs to the actin-binding proteins ADF family. (152 aa)
	A0A090LDE6	Ubiquitin carboxyl-terminal hydrolase 32. (109 aa)
	A0A090LDS8	annotation not available (508 aa)
	A0A090LE34	Cell division cycle protein 27 homolog. (812 aa)

Your Current Organism:

Strongyloides ratti

NCBI taxonomy Id: 34506
Other names: S. ratti

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A090KZR3	A0A090L477	Girdin.	Girdin.	0.426
A0A090L2B5	A0A090L6C1	Uncharacterized protein.	Striated muscle preferentially expressed protein kinase.	0.633
A0A090L2B5	A0A090L846	Uncharacterized protein.	Hemicentin-1.	0.633
A0A090L2B5	A0A090L8E5	Uncharacterized protein.	Dreadlocks.	0.476
A0A090L2B5	A0A090L9L6	Uncharacterized protein.	Integrin beta; Belongs to the integrin beta chain family.	0.496
A0A090L2B5	A0A090LBF2	Uncharacterized protein.	Armadillo-like helical domain and Armadillo-type fold domain-containing protein.	0.423
A0A090L2B5	A0A090LBS7	Uncharacterized protein.	Paramyosin, long form.	0.463
A0A090L2B5	A0A090LE34	Uncharacterized protein.	Cell division cycle protein 27 homolog.	0.487
A0A090L2B5	A0A090LGH1	Uncharacterized protein.	PDZ domain and Zinc finger, LIM-type domain-containing protein.	0.421
A0A090L2B5	A0A090LIY7	Uncharacterized protein.	GH23568p.	0.602
A0A090L2B5	A0A090LKV3	Uncharacterized protein.	Delphilin.	0.513
A0A090L2B5	A0A090LLE7	Uncharacterized protein.	Tetratricopeptide repeat protein 8.	0.487
A0A090L2B5	A0A090LPE1	Uncharacterized protein.	WH2 domain and Formin, FH2 domain-containing protein.	0.439
A0A090L2B5	A0A090MUZ3	Uncharacterized protein.	LIM domain-containing protein.	0.620
A0A090L477	A0A090KZR3	Girdin.	Girdin.	0.426
A0A090L4E4	A0A090L522	Fermitin family homolog 1.	Integrin alpha-PS2; Belongs to the integrin alpha chain family.	0.837
A0A090L4E4	A0A090L6C1	Fermitin family homolog 1.	Striated muscle preferentially expressed protein kinase.	0.822
A0A090L4E4	A0A090L846	Fermitin family homolog 1.	Hemicentin-1.	0.822
A0A090L4E4	A0A090L9L6	Fermitin family homolog 1.	Integrin beta; Belongs to the integrin beta chain family.	0.909
A0A090L4E4	A0A090LIY7	Fermitin family homolog 1.	GH23568p.	0.792