STRINGSTRING
A0A090MX03 A0A090MX03 A0A090MX14 A0A090MX14 A0A090MX67 A0A090MX67 A0A090MX77 A0A090MX77 A0A090MX90 A0A090MX90 A0A090MXA6 A0A090MXA6 A0A090MXD5 A0A090MXD5 A0A090MXD7 A0A090MXD7 A0A090MXK8 A0A090MXK8 A0A090MXL9 A0A090MXL9 A0A090MXR2 A0A090MXR2 A0A090MXT4 A0A090MXT4 A0A090MXZ6 A0A090MXZ6 A0A090MY02 A0A090MY02 A0A090MY07 A0A090MY07 A0A090MY41 A0A090MY41 A0A090MY88 A0A090MY88 A0A090MY90 A0A090MY90 A0A090MYC8 A0A090MYC8 A0A090MYC9 A0A090MYC9 A0A090MYK5 A0A090MYK5 A0A090MYM9 A0A090MYM9 A0A090MYP0 A0A090MYP0 A0A090MYP5 A0A090MYP5 A0A090MYQ8 A0A090MYQ8 A0A090MYR2 A0A090MYR2 A0A090MZ38 A0A090MZ38 A0A090MZ55 A0A090MZ55 A0A090MZ60 A0A090MZ60 A0A090MZ92 A0A090MZ92 A0A090MZ95 A0A090MZ95 A0A090MZA2 A0A090MZA2 A0A090MZF7 A0A090MZF7 A0A090MZZ3 A0A090MZZ3 A0A090MZZ4 A0A090MZZ4 A0A090N009 A0A090N009 A0A090N084 A0A090N084 LSM8 LSM8 A0A090N0D7 A0A090N0D7 A0A090N0E4 A0A090N0E4 A0A090N0Z7 A0A090N0Z7 A0A090KWI7 A0A090KWI7 A0A090KWR0 A0A090KWR0 A0A090KWV3 A0A090KWV3 A0A090KX26 A0A090KX26 A0A090KX72 A0A090KX72 A0A090KX81 A0A090KX81 A0A090KX83 A0A090KX83 A0A090KX97 A0A090KX97 A0A090KXC5 A0A090KXC5 A0A090KXE1 A0A090KXE1 A0A090KXW2 A0A090KXW2 A0A090KY69 A0A090KY69 A0A090KY87 A0A090KY87 A0A090KYP0 A0A090KYP0 A0A090KZ32 A0A090KZ32 A0A090KZK0 A0A090KZK0 A0A090KZL5 A0A090KZL5 A0A090KZW3 A0A090KZW3 A0A090KZY3 A0A090KZY3 A0A090L027 A0A090L027 A0A090L046 A0A090L046 A0A090L0E5 A0A090L0E5 A0A090L0I6 A0A090L0I6 A0A090L0K0 A0A090L0K0 A0A090L0L6 A0A090L0L6 A0A090L0P8 A0A090L0P8 A0A090L0Q1 A0A090L0Q1 A0A090L105 A0A090L105 A0A090L140 A0A090L140 A0A090L155 A0A090L155 A0A090L1F5 A0A090L1F5 A0A090L1L1 A0A090L1L1 A0A090L1P1 A0A090L1P1 A0A090L1S5 A0A090L1S5 A0A090L1V8 A0A090L1V8 A0A090L1W7 A0A090L1W7 A0A090L2I6 A0A090L2I6 A0A090L2U1 A0A090L2U1 A0A090L2Z3 A0A090L2Z3 A0A090L339 A0A090L339 A0A090L354 A0A090L354 A0A090L363 A0A090L363 A0A090L365 A0A090L365 A0A090L385 A0A090L385 A0A090L3E5 A0A090L3E5 A0A090L3G0 A0A090L3G0 A0A090L3M5 A0A090L3M5 A0A090L3S7 A0A090L3S7 A0A090L3T2 A0A090L3T2 A0A090L405 A0A090L405 A0A090L4G6 A0A090L4G6 A0A090L4V3 A0A090L4V3 A0A090L4Z4 A0A090L4Z4 A0A090L591 A0A090L591 A0A090L5C6 A0A090L5C6 A0A090L5C8 A0A090L5C8 A0A090L5D1 A0A090L5D1 A0A090L5D4 A0A090L5D4 A0A090L5M6 A0A090L5M6 A0A090L643 A0A090L643 A0A090L672 A0A090L672 A0A090L6G2 A0A090L6G2 A0A090L6I9 A0A090L6I9 A0A090L6L7 A0A090L6L7 A0A090L6P1 A0A090L6P1 A0A090L6W8 A0A090L6W8 A0A090L6Y4 A0A090L6Y4 A0A090L741 A0A090L741 A0A090L754 A0A090L754 A0A090L765 A0A090L765 A0A090L7D3 A0A090L7D3 A0A090L7H7 A0A090L7H7 A0A090L7L0 A0A090L7L0 A0A090L7L9 A0A090L7L9 A0A090L7S4 A0A090L7S4 A0A090L7U7 A0A090L7U7 A0A090L7V2 A0A090L7V2 A0A090L7Y9 A0A090L7Y9 A0A090L861 A0A090L861 A0A090L879 A0A090L879 A0A090L882 A0A090L882 A0A090L8B5 A0A090L8B5 A0A090L8I4 A0A090L8I4 A0A090L8J6 A0A090L8J6 A0A090L8K1 A0A090L8K1 A0A090L8M5 A0A090L8M5 A0A090L8Z4 A0A090L8Z4 A0A090L941 A0A090L941 A0A090L9C6 A0A090L9C6 A0A090L9L7 A0A090L9L7 A0A090L9N9 A0A090L9N9 A0A090L9P7 A0A090L9P7 A0A090L9W1 A0A090L9W1 A0A090LA20 A0A090LA20 A0A090LA51 A0A090LA51 A0A090LAI6 A0A090LAI6 A0A090LAK6 A0A090LAK6 A0A090LAL7 A0A090LAL7 A0A090LAM0 A0A090LAM0 A0A090LAT3 A0A090LAT3 A0A090LAT9 A0A090LAT9 A0A090LAY2 A0A090LAY2 A0A090LB22 A0A090LB22 A0A090LB26 A0A090LB26 A0A090LB43 A0A090LB43 A0A090LB63 A0A090LB63 A0A090LBD2 A0A090LBD2 A0A090LBD6 A0A090LBD6 A0A090LBF5 A0A090LBF5 A0A090LBK1 A0A090LBK1 A0A090LBL6 A0A090LBL6 A0A090LBP9 A0A090LBP9 A0A090LBT2 A0A090LBT2 A0A090LBU7 A0A090LBU7 A0A090LBW7 A0A090LBW7 A0A090LBY9 A0A090LBY9 A0A090LC45 A0A090LC45 A0A090LCD1 A0A090LCD1 A0A090LCI1 A0A090LCI1 A0A090LCK7 A0A090LCK7 A0A090LCP3 A0A090LCP3 A0A090LCQ3 A0A090LCQ3 A0A090LCS9 A0A090LCS9 A0A090LCW0 A0A090LCW0 A0A090LCZ2 A0A090LCZ2 A0A090LD19 A0A090LD19 A0A090LD31 A0A090LD31 A0A090LD46 A0A090LD46 A0A090LDA6 A0A090LDA6 A0A090LDD1 A0A090LDD1 A0A090LDE1 A0A090LDE1 A0A090LDG9 A0A090LDG9 A0A090LDN1 A0A090LDN1 A0A090LDQ0 A0A090LDQ0 A0A090LE15 A0A090LE15 A0A090LE74 A0A090LE74 A0A090LE77 A0A090LE77 A0A090LEB1 A0A090LEB1 A0A090LEB2 A0A090LEB2 A0A090LEE2 A0A090LEE2 A0A090LEH4 A0A090LEH4 A0A090LEK3 A0A090LEK3 A0A090LEK5 A0A090LEK5 A0A090LEU5 A0A090LEU5 A0A090LEW1 A0A090LEW1 A0A090LEY5 A0A090LEY5 A0A090LF01 A0A090LF01 A0A090LF12 A0A090LF12 A0A090LF42 A0A090LF42 A0A090LF64 A0A090LF64 A0A090LF89 A0A090LF89 A0A090LFD3 A0A090LFD3 A0A090LFF6 A0A090LFF6 A0A090LFF9 A0A090LFF9 A0A090LFG9 A0A090LFG9 A0A090LFH3 A0A090LFH3 A0A090LFN2 A0A090LFN2 A0A090LFU1 A0A090LFU1 A0A090LFU2 A0A090LFU2 A0A090LFU6 A0A090LFU6 A0A090LFU9 A0A090LFU9 A0A090LFV7 A0A090LFV7 A0A090LFW8 A0A090LFW8 LSM4 LSM4 A0A090LG64 A0A090LG64 A0A090LGB3 A0A090LGB3 A0A090LGG2 A0A090LGG2 A0A090LGK6 A0A090LGK6 A0A090LGR9 A0A090LGR9 A0A090LGT9 A0A090LGT9 A0A090LGY6 A0A090LGY6 A0A090LH09 A0A090LH09 A0A090LH16 A0A090LH16 A0A090LHA9 A0A090LHA9 A0A090LHQ1 A0A090LHQ1 A0A090LHT8 A0A090LHT8 A0A090LHU4 A0A090LHU4 A0A090LI05 A0A090LI05 A0A090LI29 A0A090LI29 A0A090LI33 A0A090LI33 A0A090LI89 A0A090LI89 A0A090LIG0 A0A090LIG0 A0A090LIL6 A0A090LIL6 A0A090LIN3 A0A090LIN3 A0A090LJ05 A0A090LJ05 A0A090LJ31 A0A090LJ31 A0A090LJD4 A0A090LJD4 A0A090LJM1 A0A090LJM1 A0A090LJM6 A0A090LJM6 A0A090LJP5 A0A090LJP5 A0A090LJQ2 A0A090LJQ2 A0A090LK28 A0A090LK28 A0A090LK36 A0A090LK36 A0A090LK60 A0A090LK60 A0A090LKE7 A0A090LKE7 A0A090LKG4 A0A090LKG4 A0A090LKN6 A0A090LKN6 A0A090LKQ9 A0A090LKQ9 A0A090LL72 A0A090LL72 A0A090LL84 A0A090LL84 A0A090LLH2 A0A090LLH2 A0A090LLV4 A0A090LLV4 A0A090LLW5 A0A090LLW5 A0A090LM60 A0A090LM60 A0A090LM92 A0A090LM92 A0A090LN11 A0A090LN11 A0A090LNN7 A0A090LNN7 A0A090LNP8 A0A090LNP8 A0A090LNQ0 A0A090LNQ0 A0A090LNT1 A0A090LNT1 LSM3 LSM3 A0A090LPU0 A0A090LPU0 A0A090LQ13 A0A090LQ13 A0A090LQ93 A0A090LQ93 A0A090LQC3 A0A090LQC3 A0A090LRB7 A0A090LRB7 A0A090LSJ2 A0A090LSJ2 A0A090LTL7 A0A090LTL7 A0A090MTW1 A0A090MTW1 A0A090MTW7 A0A090MTW7 A0A090MUU0 A0A090MUU0 A0A090MUW1 A0A090MUW1 A0A090MV32 A0A090MV32 A0A090MV41 A0A090MV41 A0A090MVL7 A0A090MVL7 A0A090MVQ3 A0A090MVQ3 A0A090MVZ3 A0A090MVZ3 A0A090MW55 A0A090MW55 A0A090MWE8 A0A090MWE8 A0A090MWI7 A0A090MWI7 A0A090MWJ4 A0A090MWJ4 A0A090MWW1 A0A090MWW1 A0A090MX00 A0A090MX00
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A090MX03RNA recognition motif domain and Nucleotide-binding, alpha-beta plait domain-containing protein. (207 aa)
A0A090MX14Uncharacterized protein. (247 aa)
A0A090MX67Uncharacterized protein. (307 aa)
A0A090MX77PRP40 pre-mRNA processing factor 40 homolog A. (731 aa)
A0A090MX90Uncharacterized protein. (130 aa)
A0A090MXA6Ubiquitin-like protein 5. (73 aa)
A0A090MXD5Activating signal cointegrator 1 complex subunit 3. (2136 aa)
A0A090MXD7Survival of motor neuron-related-splicing factor 30. (201 aa)
A0A090MXK8DNA-directed RNA polymerase II subunit RPB7. (174 aa)
A0A090MXL9Btz domain-containing protein. (426 aa)
A0A090MXR2Uncharacterized protein. (216 aa)
A0A090MXT4Polyribonucleotide 5'-hydroxyl-kinase Clp1. (436 aa)
A0A090MXZ6Pop2. (304 aa)
A0A090MY02Splicing factor U2AF 35 kDa subunit. (234 aa)
A0A090MY07Probable ATP-dependent RNA helicase DHX35. (665 aa)
A0A090MY41Roquin-1. (767 aa)
A0A090MY88Uncharacterized protein. (333 aa)
A0A090MY90U6 snRNA-associated Sm-like protein LSm6; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (81 aa)
A0A090MYC8U6 snRNA-associated Sm-like protein LSm1. (123 aa)
A0A090MYC9Exosome complex component RRP4. (299 aa)
A0A090MYK5Uncharacterized protein. (184 aa)
A0A090MYM9Cleavage stimulation factor subunit 3. (786 aa)
A0A090MYP0Poly(A) RNA polymerase GLD2. (526 aa)
A0A090MYP5E3 ubiquitin-protein ligase RBBP6. (557 aa)
A0A090MYQ8Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16. (1070 aa)
A0A090MYR2U1 small nuclear ribonucleoprotein C. (87 aa)
A0A090MZ38RNA-binding protein 42. (260 aa)
A0A090MZ55Uncharacterized protein. (345 aa)
A0A090MZ60Uncharacterized protein. (144 aa)
A0A090MZ92Mitogen-activated protein kinase organizer 1. (284 aa)
A0A090MZ95Uncharacterized protein. (240 aa)
A0A090MZA2Luc7-like protein 3. (316 aa)
A0A090MZF7Hephaestus. (672 aa)
A0A090MZZ3Beta-lactamase-like domain-containing protein. (423 aa)
A0A090MZZ4RNA recognition motif domain and Nucleotide-binding, alpha-beta plait domain-containing protein. (448 aa)
A0A090N009Regulator of nonsense transcripts 1. (836 aa)
A0A090N084Uncharacterized protein. (339 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (100 aa)
A0A090N0D7LD23303p. (1471 aa)
A0A090N0E4tRNA pseudouridine synthase A, mitochondrial. (414 aa)
A0A090N0Z7Uncharacterized protein. (640 aa)
A0A090KWI7Protein CWC15 homolog. (244 aa)
A0A090KWR0Splicing factor 3B subunit 6-like protein. (136 aa)
A0A090KWV3DnaJ homolog subfamily C member 8. (252 aa)
A0A090KX26FI03683p. (681 aa)
A0A090KX72Symplekin. (998 aa)
A0A090KX81U4/U6.U5 tri-snRNP-associated protein 2. (488 aa)
A0A090KX833'-5' exonuclease domain and Ribonuclease H-like domain-containing protein. (848 aa)
A0A090KX97Pre-mRNA-splicing factor SYF2. (243 aa)
A0A090KXC5Uncharacterized protein. (1161 aa)
A0A090KXE1Helicase ATP-binding domain-containing protein. (985 aa)
A0A090KXW2Cth1. (465 aa)
A0A090KY69Pasilla. (384 aa)
A0A090KY87Tuftelin-interacting protein 11. (585 aa)
A0A090KYP0Uncharacterized protein. (321 aa)
A0A090KZ32Histone RNA hairpin-binding protein. (344 aa)
A0A090KZK0Uncharacterized protein. (78 aa)
A0A090KZL5Parafibromin. (556 aa)
A0A090KZW3Exosome complex component RRP45. (299 aa)
A0A090KZY3Pre-mRNA-processing factor 6. (929 aa)
A0A090L027Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. (326 aa)
A0A090L046Putative cleavage and polyadenylation specificity factor subunit 4-like protein. (309 aa)
A0A090L0E5Cleavage and polyadenylation specificity factor subunit CG7185. (384 aa)
A0A090L0I6P-loop containing Nucleoside triphosphate hydrolase domain-containing protein. (1379 aa)
A0A090L0K0Polynucleotide 5'-triphosphatase; Bifunctional mRNA-capping enzyme exhibiting RNA 5'- triphosphatase activity in the N-terminal part and mRNA guanylyltransferase activity in the C-terminal part. Catalyzes the first two steps of cap formation: by removing the gamma-phosphate from the 5'-triphosphate end of nascent mRNA to yield a diphosphate end, and by transferring the gmp moiety of GTP to the 5'-diphosphate terminus. (601 aa)
A0A090L0L6ATP-dependent RNA helicase WM6. (425 aa)
A0A090L0P8Zinc finger, CCCH-type domain-containing protein. (254 aa)
A0A090L0Q1Zinc finger protein ZPR1. (436 aa)
A0A090L105Exosome complex component RRP42. (324 aa)
A0A090L140Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. In the CBC complex, ncbp-2 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires ncbp-1 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure. (164 aa)
A0A090L155annotation not available (381 aa)
A0A090L1F5Splicing factor 3B subunit 2. (506 aa)
A0A090L1L1Uncharacterized protein. (463 aa)
A0A090L1P1ShKT domain-containing protein. (181 aa)
A0A090L1S5Protein AAR2 homolog. (356 aa)
A0A090L1V8Uncharacterized protein. (375 aa)
A0A090L1W7annotation not available (464 aa)
A0A090L2I6annotation not available (249 aa)
A0A090L2U1annotation not available (324 aa)
A0A090L2Z3Cap-specific mRNA (Nucleoside-2'-O-)-methyltransferase 2. (331 aa)
A0A090L339Small nuclear ribonucleoprotein Sm D2. (116 aa)
A0A090L354Similar to Xab2 protein. (794 aa)
A0A090L363Polyribonucleotide nucleotidyltransferase 1, mitochondrial. (733 aa)
A0A090L365Topoisomerase II-associated protein PAT1 family-containing protein. (677 aa)
A0A090L385BUD13 homolog. (212 aa)
A0A090L3E5Splicing factor 3B subunit 3. (1205 aa)
A0A090L3G0RNA polymerase II subunit A C-terminal domain phosphatase SSU72. (197 aa)
A0A090L3M5annotation not available (464 aa)
A0A090L3S7Serine/arginine repetitive matrix protein 1. (388 aa)
A0A090L3T2PRP19/PSO4 homolog. (488 aa)
A0A090L405Bruno-3. (666 aa)
A0A090L4G6Cth1. (475 aa)
A0A090L4V3Second mitotic wave missing. (688 aa)
A0A090L4Z4Uncharacterized protein. (1143 aa)
A0A090L591Immunoglobulin E-set domain-containing protein. (517 aa)
A0A090L5C6U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (521 aa)
A0A090L5C8Protein Smaug. (491 aa)
A0A090L5D1U2 small nuclear ribonucleoprotein A. (227 aa)
A0A090L5D4RNA recognition motif domain and Nucleotide-binding, alpha-beta plait domain-containing protein. (324 aa)
A0A090L5M6ATP-dependent RNA helicase DHX8. (700 aa)
A0A090L643Protein BUD31 homolog. (138 aa)
A0A090L672RNA-binding protein 25. (606 aa)
A0A090L6G2Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (139 aa)
A0A090L6I9Protein crooked neck. (672 aa)
A0A090L6L7Speckle targeted PIP5K1A-regulated poly(A) polymerase. (851 aa)
A0A090L6P1Uncharacterized protein. (364 aa)
A0A090L6W8Transformer-2 sex-determining protein. (279 aa)
A0A090L6Y4U4/U6 small nuclear ribonucleoprotein Prp31. (524 aa)
A0A090L741RNA-binding protein 28. (549 aa)
A0A090L754U6 snRNA-associated Sm-like protein LSm1. (123 aa)
A0A090L765annotation not available (1228 aa)
A0A090L7D3Beta-lactamase-like domain-containing protein. (304 aa)
A0A090L7H7U4/U6 small nuclear ribonucleoprotein Prp3. (500 aa)
A0A090L7L0DNA-directed RNA polymerase II subunit RPB4. (146 aa)
A0A090L7L9Pre-mRNA-splicing factor SPF27. (221 aa)
A0A090L7S4Serine/threonine-protein kinase Smg1; Belongs to the PI3/PI4-kinase family. (2469 aa)
A0A090L7U7WW domain binding protein 11 family-containing protein. (328 aa)
A0A090L7V2tRNA methyltransferase 10 homolog B. (252 aa)
A0A090L7Y9Zinc finger matrin-type protein 2. (201 aa)
A0A090L861Serine/arginine-rich splicing factor 3. (166 aa)
A0A090L879LD29830p. (351 aa)
A0A090L882Histone RNA hairpin-binding protein. (355 aa)
A0A090L8B5Poly(A)-specific ribonuclease PARN. (645 aa)
A0A090L8I4PHF5-like family and Gamma-tubulin complex component protein family-containing protein. (931 aa)
A0A090L8J6Exosome complex component RRP40. (237 aa)
A0A090L8K1LSM14 domain-containing protein. (678 aa)
A0A090L8M5CWC16 protein family-containing protein. (258 aa)
A0A090L8Z4Protein Red. (385 aa)
A0A090L941Galectin. (161 aa)
A0A090L9C6Telomerase-binding protein EST1A. (1322 aa)
A0A090L9L7Zinc finger RNA-binding protein. (710 aa)
A0A090L9N9RNA-binding protein with serine-rich domain 1. (248 aa)
A0A090L9P7Poly(U)-binding-splicing factor PUF60. (657 aa)
A0A090L9W1Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
A0A090LA20GH04942p. (808 aa)
A0A090LA51Serine/arginine repetitive matrix protein 2. (97 aa)
A0A090LAI6annotation not available (341 aa)
A0A090LAK6Cleavage stimulation factor subunit 3. (1047 aa)
A0A090LAL7U1 small nuclear ribonucleoprotein 70 kDa. (180 aa)
A0A090LAM0RNA recognition motif domain and Nucleotide-binding, alpha-beta plait domain-containing protein. (206 aa)
A0A090LAT3CCR4-NOT transcription complex subunit 2. (359 aa)
A0A090LAT9Probable ATP-dependent RNA helicase DDX20; Belongs to the DEAD box helicase family. (730 aa)
A0A090LAY2Cell differentiation protein RCD1 homolog. (323 aa)
A0A090LB22Polyglutamine-binding protein 1. (213 aa)
A0A090LB26Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (230 aa)
A0A090LB43Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (91 aa)
A0A090LB63Hepatocellular carcinoma-associated antigen 59 family-containing protein. (204 aa)
A0A090LBD2Pre-mRNA-splicing factor RBM22. (327 aa)
A0A090LBD6Splicing factor, suppressor of white-apricot homolog. (314 aa)
A0A090LBF5Tr-type G domain-containing protein. (981 aa)
A0A090LBK1Suppressor of Ty 6 homolog; May regulate transcriptional elongation by RNA polymerase II. (1506 aa)
A0A090LBL6Probable ATP-dependent RNA helicase DDX41; Belongs to the DEAD box helicase family. (601 aa)
A0A090LBP9Pre-mRNA-splicing factor CWC22 homolog. (558 aa)
A0A090LBT2U6 snRNA-associated Sm-like protein LSm7. (108 aa)
A0A090LBU7GC-rich sequence DNA-binding factor domain-containing protein. (690 aa)
A0A090LBW7Serine/threonine-protein kinase/endoribonuclease IRE1. (977 aa)
A0A090LBY9annotation not available (557 aa)
A0A090LC45M7GpppX diphosphatase. (295 aa)
A0A090LCD1Target of rapamycin; Belongs to the PI3/PI4-kinase family. (462 aa)
A0A090LCI1Pre-mRNA 3'-end-processing factor FIP1. (501 aa)
A0A090LCK7Cleavage and polyadenylation specificity factor subunit 1. (1384 aa)
A0A090LCP3Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (386 aa)
A0A090LCQ3Cleavage stimulation factor 64 kilodalton subunit. (95 aa)
A0A090LCS9CCR4-NOT transcription complex subunit 3. (685 aa)
A0A090LCW0RNA polymerase-associated protein LEO1. (413 aa)
A0A090LCZ2Pleiotropic regulator 1. (488 aa)
A0A090LD19Serine/arginine-rich splicing factor 1. (295 aa)
A0A090LD31Poly(A) RNA polymerase GLD2. (413 aa)
A0A090LD46Uncharacterized protein. (350 aa)
A0A090LDA6Pre-mRNA-processing factor 17. (565 aa)
A0A090LDD1Trailer hitch. (353 aa)
A0A090LDE1Small nuclear ribonucleoprotein Sm D3. (128 aa)
A0A090LDG9annotation not available (637 aa)
A0A090LDN1Uncharacterized protein. (413 aa)
A0A090LDQ0RE04053p. (1074 aa)
A0A090LE15Zinc finger, RanBP2-type domain and Nucleotide-binding, alpha-beta plait domain-containing protein. (535 aa)
A0A090LE74Uncharacterized protein. (1499 aa)
A0A090LE77mRNA cap guanine-N7 methyltransferase. (537 aa)
A0A090LEB1Regulator of nonsense transcripts 1. (1015 aa)
A0A090LEB2Uncharacterized protein. (594 aa)
A0A090LEE2annotation not available (417 aa)
A0A090LEH4PAP/25A-associated domain and Nucleotidyl transferase domain-containing protein. (574 aa)
A0A090LEK3Uncharacterized protein. (338 aa)
A0A090LEK5Small nuclear ribonucleoprotein G. (77 aa)
A0A090LEU5Pre-mRNA cleavage complex 2 protein Pcf11. (845 aa)
A0A090LEW1Probable ATP-dependent RNA helicase DDX23; Belongs to the DEAD box helicase family. (707 aa)
A0A090LEY5Microfibrillar-associated protein 1. (435 aa)
A0A090LF01annotation not available (423 aa)
A0A090LF12annotation not available (436 aa)
A0A090LF42Decapping and exoribonuclease protein. (360 aa)
A0A090LF64Poly(A) RNA polymerase GLD2. (428 aa)
A0A090LF89H/ACA ribonucleoprotein complex subunit 4. (438 aa)
A0A090LFD3WD40/YVTN repeat-like-containing domain and WD40-repeat-containing domain-containing protein. (369 aa)
A0A090LFF6RNA-binding protein 39. (498 aa)
A0A090LFF9Exosome complex component RRP41. (258 aa)
A0A090LFG9Pre-mRNA-processing-splicing factor 8. (2338 aa)
A0A090LFH3Tim10/DDP family zinc finger domain-containing protein. (87 aa)
A0A090LFN2Galectin. (150 aa)
A0A090LFU15'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Plays a role in maintenance of steady-state concentration and turnover of microRNAs (miRNA) by degradation of mature miRNA. Degradation role is enhanced when in complex with paxt-1. Partially redundant to xrn-1 in miRNA guide strand degradation. Implicated in differential regulation of mRNAs such as let-7 by controlling the accumulation of mature miRNA. Positively regulates molting of the pharyngeal cuticle. (944 aa)
A0A090LFU2LD24721p. (1779 aa)
A0A090LFU65'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Plays a role in maintenance of steady-state concentration and turnover of microRNAs (miRNA) by degradation of mature miRNA. Degradation role is enhanced when in complex with paxt-1. Partially redundant to xrn-1 in miRNA guide strand degradation. Implicated in differential regulation of mRNAs such as let-7 by controlling the accumulation of mature miRNA. Positively regulates molting of the pharyngeal cuticle. (858 aa)
A0A090LFU9Small nuclear ribonucleoprotein-associated protein B. (192 aa)
A0A090LFV7Lariat debranching enzyme. (314 aa)
A0A090LFW8Matrin-type domain-containing protein. (489 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (134 aa)
A0A090LG64RNA-binding motif protein, X-linked 2. (301 aa)
A0A090LGB3CstF-50. (430 aa)
A0A090LGG2THO complex subunit 2. (1737 aa)
A0A090LGK6Transformer-2 sex-determining protein. (215 aa)
A0A090LGR9P-loop containing Nucleoside triphosphate hydrolase domain-containing protein. (600 aa)
A0A090LGT9Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (118 aa)
A0A090LGY6Protein DGCR14. (442 aa)
A0A090LH09Uncharacterized protein. (738 aa)
A0A090LH16HIV Tat-specific factor 1. (400 aa)
A0A090LHA9Poly(A) RNA polymerase GLD2. (1182 aa)
A0A090LHQ1Uncharacterized protein. (172 aa)
A0A090LHT8U5 small nuclear ribonucleoprotein 40 kDa protein. (356 aa)
A0A090LHU4Beta-catenin-like protein 1. (547 aa)
A0A090LI05Cleavage stimulation factor 64 kilodalton subunit. (359 aa)
A0A090LI29Uncharacterized protein. (1151 aa)
A0A090LI33M7GpppN-mRNA hydrolase. (163 aa)
A0A090LI89Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (88 aa)
A0A090LIG0tRNA pseudouridine synthase. (377 aa)
A0A090LIL6annotation not available (457 aa)
A0A090LIN3Exosome component 10. (746 aa)
A0A090LJ05PAB-dependent poly(A)-specific ribonuclease subunit PAN3. (598 aa)
A0A090LJ31Decapping protein 1. (298 aa)
A0A090LJD4Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (645 aa)
A0A090LJM1Protein mago nashi. (149 aa)
A0A090LJM6CCR4-NOT transcription complex subunit 1. (2066 aa)
A0A090LJP5U6 snRNA-associated Sm-like protein LSm2. (428 aa)
A0A090LJQ2Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. (124 aa)
A0A090LK28Exosome complex component RRP46. (223 aa)
A0A090LK36G-patch domain-containing protein. (750 aa)
A0A090LK60PTB/PI domain and Pleckstrin homology-like domain-containing protein. (295 aa)
A0A090LKE7Uncharacterized protein. (135 aa)
A0A090LKG4Ornithine decarboxylase antizyme family and Acyl-CoA N-acyltransferase domain-containing protein. (148 aa)
A0A090LKN6Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (218 aa)
A0A090LKQ9Methylosome subunit pICln. (192 aa)
A0A090LL72Cactin. (591 aa)
A0A090LL84WD40/YVTN repeat-like-containing domain and WD40-repeat-containing domain-containing protein. (889 aa)
A0A090LLH2Squamous cell carcinoma antigen recognized by T-cells 3. (789 aa)
A0A090LLV4Probable ATP-dependent RNA helicase DDX46; Belongs to the DEAD box helicase family. (695 aa)
A0A090LLW5DnaJ homolog subfamily C member 17. (296 aa)
A0A090LM60Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. (125 aa)
A0A090LM92Transcription initiation factor TFIID subunit 10. (134 aa)
A0A090LN11Tristetraprolin. (325 aa)
A0A090LNN7SC35. (238 aa)
A0A090LNP8M7GpppN-mRNA hydrolase. (514 aa)
A0A090LNQ0Uncharacterized protein. (653 aa)
A0A090LNT1Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (665 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (100 aa)
A0A090LPU0Splicing factor 3A subunit 2. (234 aa)
A0A090LQ13Uncharacterized protein. (296 aa)
A0A090LQ93LD21120p. (284 aa)
A0A090LQC3ATP-dependent RNA helicase DHX8. (1162 aa)
A0A090LRB7WW domain-binding protein 4. (387 aa)
A0A090LSJ2Uncharacterized protein. (204 aa)
A0A090LTL7Beta-lactamase-like domain-containing protein. (505 aa)
A0A090MTW1ATP-dependent RNA helicase DHX8. (832 aa)
A0A090MTW7Beta-lactamase-like domain-containing protein. (631 aa)
A0A090MUU0Cleavage and polyadenylation specificity factor subunit 2. (929 aa)
A0A090MUW1Pre-mRNA-splicing factor 38B. (293 aa)
A0A090MV32TAR DNA-binding protein 43. (410 aa)
A0A090MV41Cleavage and polyadenylation specificity factor 73. (632 aa)
A0A090MVL7LD35640p. (603 aa)
A0A090MVQ3Splicing factor 1. (452 aa)
A0A090MVZ3Serrate RNA effector molecule homolog. (669 aa)
A0A090MW55Cap-specific mRNA (Nucleoside-2'-O-)-methyltransferase 1. (846 aa)
A0A090MWE8Novel protein similar to human splicing factor 3a, subunit 1, 120kD. (647 aa)
A0A090MWI7RNA-binding protein fusilli. (226 aa)
A0A090MWJ4U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein. (155 aa)
A0A090MWW1Probable ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family. (433 aa)
A0A090MX00Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. (248 aa)
Your Current Organism:
Strongyloides ratti
NCBI taxonomy Id: 34506
Other names: S. ratti
Server load: low (12%) [HD]