35 items (Strongyloides ratti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A090LG07	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. (536 aa)
	A0A090LAJ2	ATPase, F0 complex, subunit D, mitochondrial family-containing protein. (190 aa)
	A0A090LAX5	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g. (131 aa)
	A0A090LCY7	V-type proton ATPase subunit E 2. (223 aa)
	A0A090LD00	ATPase, F1 complex, epsilon subunit, mitochondrial family-containing protein. (56 aa)
	A0A090LD28	ATP synthase subunit O, mitochondrial. (205 aa)
	A0A090LDQ5	ATPase, vacuolar ER assembly factor, Vma12 family-containing protein. (268 aa)
	A0A090LDR7	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. (531 aa)
	A0A090LEZ3	Uncharacterized protein. (613 aa)
	A0A090LF69	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase. (918 aa)
	A0A090LFD9	V-type proton ATPase subunit C; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (393 aa)
	A0A090LFN5	V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family. (349 aa)
	A0A090LAG4	Belongs to the ATPase C chain family. (113 aa)
	A0A090LGP0	Mitochondrial F1-F0 ATP synthase subunit F, predicted family-containing protein. (153 aa)
	A0A090LIF7	BIG/ATPase V1 complex, subunit S1 family-containing protein. (413 aa)
	A0A090LJ99	ATP synthase F(0) complex subunit B1, mitochondrial. (308 aa)
	A0A090LLZ9	V-type proton ATPase subunit; Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (86 aa)
	A0A090LND1	ATPase, F0 complex, subunit E, mitochondrial family-containing protein. (107 aa)
	A0A090LV18	Uncharacterized protein. (613 aa)
	A0A090MX72	V-type proton ATPase subunit F; Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (122 aa)
	A0A090MXB7	V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (125 aa)
	A0A090MZ09	MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane. (642 aa)
	A0A090KYY4	V-type proton ATPase subunit F; Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (122 aa)
	A0A090KWX5	ATPase, F0 complex, subunit F6, mitochondrial family-containing protein. (135 aa)
	A0A090L3L6	ATP synthase subunit gamma, mitochondrial. (299 aa)
	A0A090L515	V-type proton ATPase 21 kDa proteolipid subunit; Belongs to the V-ATPase proteolipid subunit family. (208 aa)
	A0A090L540	ATP synthase subunit delta, mitochondrial. (196 aa)
	A0A090L5P0	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family. (492 aa)
	A0A090L3F1	V-type proton ATPase subunit H; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit H activates ATPase activity of the enzyme and couples ATPase activity to proton flow. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. (472 aa)
	A0A090L6L9	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase. (846 aa)
	A0A090L834	Alkylated DNA repair protein alkB homolog 1. (332 aa)
	A0A090L967	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (161 aa)
	A0A090L9A0	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (165 aa)
	A0A090L9B8	V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (134 aa)
	A0A090L9F4	V-type proton ATPase subunit D. (249 aa)

Your Current Organism:

Strongyloides ratti

NCBI taxonomy Id: 34506
Other names: S. ratti

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A090KWX5	A0A090L3L6	ATPase, F0 complex, subunit F6, mitochondrial family-containing protein.	ATP synthase subunit gamma, mitochondrial.	0.999
A0A090KWX5	A0A090L515	ATPase, F0 complex, subunit F6, mitochondrial family-containing protein.	V-type proton ATPase 21 kDa proteolipid subunit; Belongs to the V-ATPase proteolipid subunit family.	0.946
A0A090KWX5	A0A090L540	ATPase, F0 complex, subunit F6, mitochondrial family-containing protein.	ATP synthase subunit delta, mitochondrial.	0.999
A0A090KWX5	A0A090L967	ATPase, F0 complex, subunit F6, mitochondrial family-containing protein.	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	0.946
A0A090KWX5	A0A090L9A0	ATPase, F0 complex, subunit F6, mitochondrial family-containing protein.	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	0.946
A0A090KWX5	A0A090LAG4	ATPase, F0 complex, subunit F6, mitochondrial family-containing protein.	Belongs to the ATPase C chain family.	0.997
A0A090KWX5	A0A090LAJ2	ATPase, F0 complex, subunit F6, mitochondrial family-containing protein.	ATPase, F0 complex, subunit D, mitochondrial family-containing protein.	0.999
A0A090KWX5	A0A090LAX5	ATPase, F0 complex, subunit F6, mitochondrial family-containing protein.	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g.	0.999
A0A090KWX5	A0A090LD00	ATPase, F0 complex, subunit F6, mitochondrial family-containing protein.	ATPase, F1 complex, epsilon subunit, mitochondrial family-containing protein.	0.998
A0A090KWX5	A0A090LD28	ATPase, F0 complex, subunit F6, mitochondrial family-containing protein.	ATP synthase subunit O, mitochondrial.	0.999
A0A090KWX5	A0A090LDR7	ATPase, F0 complex, subunit F6, mitochondrial family-containing protein.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.998
A0A090KWX5	A0A090LG07	ATPase, F0 complex, subunit F6, mitochondrial family-containing protein.	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.999
A0A090KWX5	A0A090LGP0	ATPase, F0 complex, subunit F6, mitochondrial family-containing protein.	Mitochondrial F1-F0 ATP synthase subunit F, predicted family-containing protein.	0.999
A0A090KWX5	A0A090LJ99	ATPase, F0 complex, subunit F6, mitochondrial family-containing protein.	ATP synthase F(0) complex subunit B1, mitochondrial.	0.999
A0A090KWX5	A0A090LND1	ATPase, F0 complex, subunit F6, mitochondrial family-containing protein.	ATPase, F0 complex, subunit E, mitochondrial family-containing protein.	0.999
A0A090KYY4	A0A090L3F1	V-type proton ATPase subunit F; Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	V-type proton ATPase subunit H; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit H activates ATPase activity of the enzyme and couples ATPase activity to proton flow. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system.	0.983
A0A090KYY4	A0A090L3L6	V-type proton ATPase subunit F; Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	ATP synthase subunit gamma, mitochondrial.	0.841
A0A090KYY4	A0A090L515	V-type proton ATPase subunit F; Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	V-type proton ATPase 21 kDa proteolipid subunit; Belongs to the V-ATPase proteolipid subunit family.	0.988
A0A090KYY4	A0A090L540	V-type proton ATPase subunit F; Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	ATP synthase subunit delta, mitochondrial.	0.858
A0A090KYY4	A0A090L5P0	V-type proton ATPase subunit F; Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.	0.997