39 items (Strongyloides ratti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A090L788	Uncharacterized protein. (134 aa)
	A0A090L861	Serine/arginine-rich splicing factor 3. (166 aa)
	A0A090LA51	Serine/arginine repetitive matrix protein 2. (97 aa)
	A0A090LAH5	Belongs to the ubiquitin-conjugating enzyme family. (247 aa)
	A0A090LAM0	RNA recognition motif domain and Nucleotide-binding, alpha-beta plait domain-containing protein. (206 aa)
	A0A090LBP9	Pre-mRNA-splicing factor CWC22 homolog. (558 aa)
	A0A090LC64	N-glycosylase/DNA lyase. (305 aa)
	A0A090KYP0	Uncharacterized protein. (321 aa)
	A0A090N101	RNA recognition motif domain and Nucleotide-binding, alpha-beta plait domain-containing protein. (2872 aa)
	A0A090N0I1	annotation not available (432 aa)
	A0A090MZA2	Luc7-like protein 3. (316 aa)
	A0A090L124	Nuclear protein UKp68. (606 aa)
	A0A090L1L1	Uncharacterized protein. (463 aa)
	A0A090MY02	Splicing factor U2AF 35 kDa subunit. (234 aa)
	A0A090MXL9	Btz domain-containing protein. (426 aa)
	A0A090MXJ6	annotation not available (575 aa)
	A0A090MXE6	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (441 aa)
	A0A090L2A7	Protein NRDE2 homolog. (1598 aa)
	A0A090MX90	Uncharacterized protein. (130 aa)
	A0A090MX03	RNA recognition motif domain and Nucleotide-binding, alpha-beta plait domain-containing protein. (207 aa)
	A0A090MWU2	annotation not available (462 aa)
	A0A090MVH2	Uncharacterized protein. (339 aa)
	A0A090MU36	E3 ubiquitin-protein ligase TRIP12. (1951 aa)
	A0A090LRN1	Surfeit locus 2 family-containing protein. (213 aa)
	A0A090LQ93	LD21120p. (284 aa)
	A0A090LNN7	SC35. (238 aa)
	A0A090LKJ2	Uncharacterized protein. (627 aa)
	A0A090LIL6	annotation not available (457 aa)
	A0A090LI05	Cleavage stimulation factor 64 kilodalton subunit. (359 aa)
	A0A090LF12	annotation not available (436 aa)
	A0A090LEB2	Uncharacterized protein. (594 aa)
	A0A090LDT6	Homeotic protein antennapedia. (284 aa)
	A0A090LD19	Serine/arginine-rich splicing factor 1. (295 aa)
	A0A090L405	Bruno-3. (666 aa)
	A0A090L4D6	Nuclear inhibitor of protein phosphatase 1. (311 aa)
	A0A090L5C6	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (521 aa)
	A0A090L5D4	RNA recognition motif domain and Nucleotide-binding, alpha-beta plait domain-containing protein. (324 aa)
	A0A090L672	RNA-binding protein 25. (606 aa)
	A0A090L6L7	Speckle targeted PIP5K1A-regulated poly(A) polymerase. (851 aa)

Your Current Organism:

Strongyloides ratti

NCBI taxonomy Id: 34506
Other names: S. ratti

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A090KYP0	A0A090MVH2	Uncharacterized protein.	Uncharacterized protein.	0.575
A0A090L124	A0A090L5C6	Nuclear protein UKp68.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.410
A0A090L124	A0A090LD19	Nuclear protein UKp68.	Serine/arginine-rich splicing factor 1.	0.430
A0A090L124	A0A090LI05	Nuclear protein UKp68.	Cleavage stimulation factor 64 kilodalton subunit.	0.517
A0A090L124	A0A090MU36	Nuclear protein UKp68.	E3 ubiquitin-protein ligase TRIP12.	0.420
A0A090L124	A0A090MVH2	Nuclear protein UKp68.	Uncharacterized protein.	0.669
A0A090L1L1	A0A090MVH2	Uncharacterized protein.	Uncharacterized protein.	0.575
A0A090L405	A0A090L5D4	Bruno-3.	RNA recognition motif domain and Nucleotide-binding, alpha-beta plait domain-containing protein.	0.516
A0A090L4D6	A0A090L672	Nuclear inhibitor of protein phosphatase 1.	RNA-binding protein 25.	0.578
A0A090L4D6	A0A090LA51	Nuclear inhibitor of protein phosphatase 1.	Serine/arginine repetitive matrix protein 2.	0.550
A0A090L4D6	A0A090MX90	Nuclear inhibitor of protein phosphatase 1.	Uncharacterized protein.	0.550
A0A090L5C6	A0A090L124	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	Nuclear protein UKp68.	0.410
A0A090L5C6	A0A090L672	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	RNA-binding protein 25.	0.978
A0A090L5C6	A0A090L861	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	Serine/arginine-rich splicing factor 3.	0.946
A0A090L5C6	A0A090LA51	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	Serine/arginine repetitive matrix protein 2.	0.449
A0A090L5C6	A0A090LAM0	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	RNA recognition motif domain and Nucleotide-binding, alpha-beta plait domain-containing protein.	0.783
A0A090L5C6	A0A090LBP9	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	Pre-mRNA-splicing factor CWC22 homolog.	0.495
A0A090L5C6	A0A090LD19	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	Serine/arginine-rich splicing factor 1.	0.965
A0A090L5C6	A0A090LI05	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	Cleavage stimulation factor 64 kilodalton subunit.	0.823
A0A090L5C6	A0A090LNN7	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	SC35.	0.940