11 items (Strongyloides ratti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A090L846	Hemicentin-1. (5391 aa)
	A0A090L901	FI18374p1. (1031 aa)
	A0A090LD64	annotation not available (550 aa)
	A0A090LGX8	annotation not available (588 aa)
	A0A090LJ67	Calmodulin; Belongs to the calmodulin family. (149 aa)
	A0A090LKA3	Protein sarah. (205 aa)
	A0A090MUA7	Ryanodine receptor 1. (5303 aa)
	A0A090MYS2	annotation not available (802 aa)
	A0A090MYT5	3-phosphoinositide-dependent protein kinase 1. (918 aa)
	A0A090L484	Uncharacterized protein. (1569 aa)
	A0A090L6C1	Striated muscle preferentially expressed protein kinase. (619 aa)

Your Current Organism:

Strongyloides ratti

NCBI taxonomy Id: 34506
Other names: S. ratti

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A090L484	A0A090MYT5	Uncharacterized protein.	3-phosphoinositide-dependent protein kinase 1.	0.578
A0A090L6C1	A0A090L846	Striated muscle preferentially expressed protein kinase.	Hemicentin-1.	0.423
A0A090L6C1	A0A090LD64	Striated muscle preferentially expressed protein kinase.	annotation not available	0.594
A0A090L6C1	A0A090LJ67	Striated muscle preferentially expressed protein kinase.	Calmodulin; Belongs to the calmodulin family.	0.749
A0A090L6C1	A0A090MUA7	Striated muscle preferentially expressed protein kinase.	Ryanodine receptor 1.	0.526
A0A090L846	A0A090L6C1	Hemicentin-1.	Striated muscle preferentially expressed protein kinase.	0.423
A0A090L846	A0A090LD64	Hemicentin-1.	annotation not available	0.594
A0A090L846	A0A090LJ67	Hemicentin-1.	Calmodulin; Belongs to the calmodulin family.	0.749
A0A090L846	A0A090MUA7	Hemicentin-1.	Ryanodine receptor 1.	0.526
A0A090LD64	A0A090L6C1	annotation not available	Striated muscle preferentially expressed protein kinase.	0.594
A0A090LD64	A0A090L846	annotation not available	Hemicentin-1.	0.594
A0A090LD64	A0A090LJ67	annotation not available	Calmodulin; Belongs to the calmodulin family.	0.952
A0A090LGX8	A0A090LJ67	annotation not available	Calmodulin; Belongs to the calmodulin family.	0.580
A0A090LJ67	A0A090L6C1	Calmodulin; Belongs to the calmodulin family.	Striated muscle preferentially expressed protein kinase.	0.749
A0A090LJ67	A0A090L846	Calmodulin; Belongs to the calmodulin family.	Hemicentin-1.	0.749
A0A090LJ67	A0A090LD64	Calmodulin; Belongs to the calmodulin family.	annotation not available	0.952
A0A090LJ67	A0A090LGX8	Calmodulin; Belongs to the calmodulin family.	annotation not available	0.580
A0A090LJ67	A0A090LKA3	Calmodulin; Belongs to the calmodulin family.	Protein sarah.	0.607
A0A090LJ67	A0A090MUA7	Calmodulin; Belongs to the calmodulin family.	Ryanodine receptor 1.	0.995
A0A090LJ67	A0A090MYS2	Calmodulin; Belongs to the calmodulin family.	annotation not available	0.834