(26 nodes) Cytoplasmic microtubule organization network (Strongyloides ratti)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A090MYT0	Hook-related protein family-containing protein. (678 aa)
	A0A090L573	Gamma-tubulin complex component. (640 aa)
	A0A090L597	Uncharacterized protein. (747 aa)
	A0A090L5U7	Restin homolog. (1225 aa)
	A0A090L5Y7	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (700 aa)
	A0A090L9J2	Patronin. (1168 aa)
	A0A090LA24	Ataxin-2 homolog. (1125 aa)
	A0A090KX45	Uncharacterized protein. (1097 aa)
	A0A090KZR3	Girdin. (1501 aa)
	A0A090L3Y8	CAP Gly-rich domain-containing protein. (1027 aa)
	A0A090L477	Girdin. (252 aa)
	A0A090MZK3	Short stop. (1631 aa)
	A0A090LAR8	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (589 aa)
	A0A090L4T9	Cysteine-rich PDZ-binding protein. (96 aa)
	A0A090LEA2	Short stop. (2656 aa)
	A0A090LFP1	Dynein heavy chain, cytoplasmic. (4646 aa)
	A0A090LI84	Uncharacterized protein. (550 aa)
	A0A090LIH8	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (639 aa)
	A0A090LIL8	Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity. (261 aa)
	A0A090LJM6	CCR4-NOT transcription complex subunit 1. (2066 aa)
	A0A090LKL8	Plectin repeat and Calponin homology domain and Spectrin/alpha-actinin repeat-containing protein. (3651 aa)
	A0A090N032	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (442 aa)
	A0A090LL19	Restin homolog. (1598 aa)
	A0A090MWR4	ADP-ribosylation factor-like protein 2; Belongs to the small GTPase superfamily. Arf family. (184 aa)
	A0A090MXR4	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome. (456 aa)
	A0A090MYL2	Short stop. (290 aa)

Your Current Organism:

Strongyloides ratti

NCBI taxonomy Id: 34506
Other names: S. ratti

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A090KX45	A0A090L9J2	Uncharacterized protein.	Patronin.	0.499
A0A090KZR3	A0A090L477	Girdin.	Girdin.	0.426
A0A090L3Y8	A0A090L5U7	CAP Gly-rich domain-containing protein.	Restin homolog.	0.720
A0A090L3Y8	A0A090LFP1	CAP Gly-rich domain-containing protein.	Dynein heavy chain, cytoplasmic.	0.679
A0A090L3Y8	A0A090N032	CAP Gly-rich domain-containing protein.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.473
A0A090L477	A0A090KZR3	Girdin.	Girdin.	0.426
A0A090L573	A0A090MXR4	Gamma-tubulin complex component.	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.	0.999
A0A090L573	A0A090MYT0	Gamma-tubulin complex component.	Hook-related protein family-containing protein.	0.424
A0A090L5U7	A0A090L3Y8	Restin homolog.	CAP Gly-rich domain-containing protein.	0.720
A0A090L5U7	A0A090L5Y7	Restin homolog.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.615
A0A090L5U7	A0A090LAR8	Restin homolog.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.615
A0A090L5U7	A0A090LFP1	Restin homolog.	Dynein heavy chain, cytoplasmic.	0.948
A0A090L5U7	A0A090LIH8	Restin homolog.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.615
A0A090L5U7	A0A090LL19	Restin homolog.	Restin homolog.	0.881
A0A090L5U7	A0A090MYT0	Restin homolog.	Hook-related protein family-containing protein.	0.429
A0A090L5Y7	A0A090L5U7	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Restin homolog.	0.615
A0A090L5Y7	A0A090L9J2	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Patronin.	0.486
A0A090L5Y7	A0A090LFP1	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Dynein heavy chain, cytoplasmic.	0.452
A0A090L5Y7	A0A090N032	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.422
A0A090L9J2	A0A090KX45	Patronin.	Uncharacterized protein.	0.499