49 items (Strongyloides ratti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A090MZ11	F-box domain and Leucine-rich repeat, cysteine-containing subtype-containing protein. (712 aa)
	A0A090KWE5	Zinc finger, SWIM-type domain-containing protein. (1571 aa)
	A0A090KYD5	RING-box protein 2. (194 aa)
	A0A090KYS9	Fizzy/cell division cycle 20 related 1. (526 aa)
	A0A090KZR7	CULT domain-containing protein. (157 aa)
	A0A090L283	Kelch-type beta propeller domain-containing protein. (453 aa)
	A0A090L2K6	RING-box protein 2. (107 aa)
	A0A090L4N1	Nrf2-associated protein keap1b. (545 aa)
	A0A090L4S7	Cell division cycle protein 20 homolog. (500 aa)
	A0A090L667	Uncharacterized protein. (795 aa)
	A0A090L6C8	CULT domain-containing protein. (712 aa)
	A0A090L709	Programmed cell death protein 6. (178 aa)
	A0A090L7C1	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (92 aa)
	A0A090L8D8	Anaphase-promoting complex subunit 2; Belongs to the cullin family. (742 aa)
	A0A090L9Z1	AT07979p1. (239 aa)
	A0A090LAI7	E3 ubiquitin-protein ligase RBX1. (108 aa)
	A0A090LB73	Cullin 1a; Belongs to the cullin family. (778 aa)
	A0A090LBU2	Acyl-CoA N-acyltransferase domain-containing protein. (409 aa)
	A0A090LDD9	Cullin, N-terminal domain and Cullin repeat-like-containing domain-containing protein; Belongs to the cullin family. (277 aa)
	A0A090LDW9	Transcription elongation factor B polypeptide 2. (120 aa)
	A0A090LE34	Cell division cycle protein 27 homolog. (812 aa)
	A0A090LF32	annotation not available (571 aa)
	A0A090LFJ5	ATP synthase subunit s-like protein. (446 aa)
	A0A090LFR5	F-box domain and F-box associated (FBA) domain and Galactose-binding domain-like-containing protein. (277 aa)
	A0A090LFS7	Uncharacterized protein. (479 aa)
	A0A090LG88	Cell division cycle protein 16 homolog. (678 aa)
	A0A090LI62	60 kDa lysophospholipase. (722 aa)
	A0A090LI65	F-box domain-containing protein. (374 aa)
	A0A090LJZ4	annotation not available (829 aa)
	A0A090LKI2	annotation not available (895 aa)
	A0A090LKK1	Cullin 1a; Belongs to the cullin family. (784 aa)
	A0A090LLR4	Calcyclin-binding protein. (224 aa)
	A0A090LNP5	Kelch-like protein diablo. (888 aa)
	A0A090LP48	GH26238p2. (556 aa)
	A0A090LUC9	F-box domain-containing protein. (622 aa)
	A0A090MWP2	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (96 aa)
	A0A090MWZ1	Kelch repeat type 1 and Kelch-type beta propeller domain-containing protein. (366 aa)
	A0A090MX31	F-box domain-containing protein. (743 aa)
	A0A090MX89	Acyl-CoA N-acyltransferase domain-containing protein. (304 aa)
	A0A090MXB9	annotation not available (572 aa)
	A0A090MXW6	Cullin 1a; Belongs to the cullin family. (444 aa)
	A0A090MXY2	Cell division cycle protein 23 homolog. (608 aa)
	A0A090MXY7	annotation not available (256 aa)
	A0A090MY05	WD40/YVTN repeat-like-containing domain and WD40-repeat-containing domain-containing protein. (306 aa)
	A0A090MYA6	Programmed cell death protein 6. (183 aa)
	A0A090MYX0	Cullin-4A; Belongs to the cullin family. (883 aa)
	A0A090MZP4	Cullin-5; Belongs to the cullin family. (1259 aa)
	A0A090MZU0	Anaphase-promoting complex subunit 10. (207 aa)
	A0A090N0L4	Fizzy/cell division cycle 20 related 1. (532 aa)

Your Current Organism:

Strongyloides ratti

NCBI taxonomy Id: 34506
Other names: S. ratti

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A090KWE5	A0A090LAI7	Zinc finger, SWIM-type domain-containing protein.	E3 ubiquitin-protein ligase RBX1.	0.579
A0A090KWE5	A0A090LB73	Zinc finger, SWIM-type domain-containing protein.	Cullin 1a; Belongs to the cullin family.	0.676
A0A090KWE5	A0A090LDW9	Zinc finger, SWIM-type domain-containing protein.	Transcription elongation factor B polypeptide 2.	0.688
A0A090KYD5	A0A090KYS9	RING-box protein 2.	Fizzy/cell division cycle 20 related 1.	0.475
A0A090KYD5	A0A090KZR7	RING-box protein 2.	CULT domain-containing protein.	0.575
A0A090KYD5	A0A090L4N1	RING-box protein 2.	Nrf2-associated protein keap1b.	0.880
A0A090KYD5	A0A090L4S7	RING-box protein 2.	Cell division cycle protein 20 homolog.	0.475
A0A090KYD5	A0A090L667	RING-box protein 2.	Uncharacterized protein.	0.729
A0A090KYD5	A0A090L6C8	RING-box protein 2.	CULT domain-containing protein.	0.575
A0A090KYD5	A0A090L7C1	RING-box protein 2.	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	0.593
A0A090KYD5	A0A090L8D8	RING-box protein 2.	Anaphase-promoting complex subunit 2; Belongs to the cullin family.	0.779
A0A090KYD5	A0A090LAI7	RING-box protein 2.	E3 ubiquitin-protein ligase RBX1.	0.739
A0A090KYD5	A0A090LB73	RING-box protein 2.	Cullin 1a; Belongs to the cullin family.	0.949
A0A090KYD5	A0A090LBU2	RING-box protein 2.	Acyl-CoA N-acyltransferase domain-containing protein.	0.593
A0A090KYD5	A0A090LDD9	RING-box protein 2.	Cullin, N-terminal domain and Cullin repeat-like-containing domain-containing protein; Belongs to the cullin family.	0.850
A0A090KYD5	A0A090LDW9	RING-box protein 2.	Transcription elongation factor B polypeptide 2.	0.952
A0A090KYD5	A0A090LE34	RING-box protein 2.	Cell division cycle protein 27 homolog.	0.747
A0A090KYD5	A0A090LF32	RING-box protein 2.	annotation not available	0.608
A0A090KYD5	A0A090LFR5	RING-box protein 2.	F-box domain and F-box associated (FBA) domain and Galactose-binding domain-like-containing protein.	0.667
A0A090KYD5	A0A090LG88	RING-box protein 2.	Cell division cycle protein 16 homolog.	0.643