8 items (Strongyloides ratti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A090KZL5	Parafibromin. (556 aa)
	A0A090MYQ9	FACT complex subunit SPT16. (1034 aa)
	A0A090LHR6	Cyclin-T; Belongs to the cyclin family. (305 aa)
	A0A090LH56	annotation not available (624 aa)
	A0A090LCW0	RNA polymerase-associated protein LEO1. (413 aa)
	A0A090LBV4	annotation not available (470 aa)
	A0A090LBK1	Suppressor of Ty 6 homolog; May regulate transcriptional elongation by RNA polymerase II. (1506 aa)
	A0A090L2J0	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (483 aa)

Your Current Organism:

Strongyloides ratti

NCBI taxonomy Id: 34506
Other names: S. ratti

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A090KZL5	A0A090L2J0	Parafibromin.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.432
A0A090KZL5	A0A090LBK1	Parafibromin.	Suppressor of Ty 6 homolog; May regulate transcriptional elongation by RNA polymerase II.	0.959
A0A090KZL5	A0A090LCW0	Parafibromin.	RNA polymerase-associated protein LEO1.	0.999
A0A090KZL5	A0A090LH56	Parafibromin.	annotation not available	0.804
A0A090KZL5	A0A090LHR6	Parafibromin.	Cyclin-T; Belongs to the cyclin family.	0.571
A0A090KZL5	A0A090MYQ9	Parafibromin.	FACT complex subunit SPT16.	0.998
A0A090L2J0	A0A090KZL5	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	Parafibromin.	0.432
A0A090L2J0	A0A090LBV4	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	annotation not available	0.645
A0A090L2J0	A0A090LHR6	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	Cyclin-T; Belongs to the cyclin family.	0.737
A0A090L2J0	A0A090MYQ9	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	FACT complex subunit SPT16.	0.727
A0A090LBK1	A0A090KZL5	Suppressor of Ty 6 homolog; May regulate transcriptional elongation by RNA polymerase II.	Parafibromin.	0.959
A0A090LBK1	A0A090LBV4	Suppressor of Ty 6 homolog; May regulate transcriptional elongation by RNA polymerase II.	annotation not available	0.861
A0A090LBK1	A0A090LCW0	Suppressor of Ty 6 homolog; May regulate transcriptional elongation by RNA polymerase II.	RNA polymerase-associated protein LEO1.	0.998
A0A090LBK1	A0A090LH56	Suppressor of Ty 6 homolog; May regulate transcriptional elongation by RNA polymerase II.	annotation not available	0.711
A0A090LBK1	A0A090LHR6	Suppressor of Ty 6 homolog; May regulate transcriptional elongation by RNA polymerase II.	Cyclin-T; Belongs to the cyclin family.	0.427
A0A090LBK1	A0A090MYQ9	Suppressor of Ty 6 homolog; May regulate transcriptional elongation by RNA polymerase II.	FACT complex subunit SPT16.	0.990
A0A090LBV4	A0A090L2J0	annotation not available	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.645
A0A090LBV4	A0A090LBK1	annotation not available	Suppressor of Ty 6 homolog; May regulate transcriptional elongation by RNA polymerase II.	0.861
A0A090LBV4	A0A090LCW0	annotation not available	RNA polymerase-associated protein LEO1.	0.436
A0A090LBV4	A0A090LH56	annotation not available	annotation not available	0.657