(55 nodes) Regulation of multicellular organism growth network (Strongyloides ratti)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A090MYR4	Putative ribosomal RNA methyltransferase NOP2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (873 aa)
	A0A090N0Z3	Beclin-1. (413 aa)
	A0A090N0R7	Guanylate cyclase. (1521 aa)
	A0A090N071	Prohibitin. (296 aa)
	A0A090MZW0	Intraflagellar transport protein 80 homolog. (764 aa)
	A0A090MZH2	Heparin sulfate O-sulfotransferase. (302 aa)
	A0A090MYU4	Netrin receptor DCC. (1589 aa)
	A0A090KWJ1	Uncharacterized protein. (839 aa)
	A0A090KXW5	Uncharacterized protein. (158 aa)
	A0A090L057	GH04846p. (307 aa)
	A0A090L091	Frizzled domain-containing protein. (1369 aa)
	A0A090L2C9	Rim. (1735 aa)
	A0A090L3C5	Mitochondrial import inner membrane translocase subunit Tim9. (81 aa)
	A0A090L429	annotation not available (566 aa)
	A0A090L4D0	Uridine 5'-monophosphate synthase. (469 aa)
	A0A090L4M1	Mothers against decapentaplegic homolog. (416 aa)
	A0A090L4M2	Maverick. (312 aa)
	A0A090L7F8	Uncharacterized protein. (508 aa)
	A0A090L7F9	Protein TFG. (449 aa)
	A0A090L8M0	annotation not available (356 aa)
	A0A090LAN2	Autophagy-specific gene 1. (964 aa)
	A0A090LAY6	Hematopoietically-expressed homeobox protein HHEX. (260 aa)
	A0A090LBI5	Megalin. (4791 aa)
	A0A090LCC5	Retinoblastoma family protein. (698 aa)
	A0A090LCL3	Loss of heterozygosity 12 chromosomal region 1 protein. (221 aa)
	A0A090LCM7	Guanine nucleotide-binding protein-like 3-like protein. (567 aa)
	A0A090LDD3	Mothers against decapentaplegic homolog. (674 aa)
	A0A090LDH7	Phosphodiesterase. (1437 aa)
	A0A090LDP1	Helix loop helix protein 106. (1231 aa)
	A0A090LDR4	Syntaxin-4. (288 aa)
	A0A090LFI0	Eukaryotic translation initiation factor 2 subunit 2. (245 aa)
	A0A090LFP2	Zona pellucida domain and von Willebrand factor, type A domain-containing protein. (2005 aa)
	A0A090LGA8	Prolyl 4-hydroxylase alpha-related protein PH4[alpha]EFB. (546 aa)
	A0A090LGY9	CAP domain-containing protein; Belongs to the CRISP family. (359 aa)
	A0A090LHL0	Protein dpy-30 homolog. (170 aa)
	A0A090LJF9	Reticulon-4-interacting protein 1, mitochondrial. (324 aa)
	A0A090LJU9	Belongs to the syntaxin family. (311 aa)
	A0A090LLG6	Dynamin-like 120 kDa protein, mitochondrial; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (921 aa)
	A0A090LLN1	Contactin. (1256 aa)
	A0A090LM00	Collagen alpha-5(IV) chain. (348 aa)
	A0A090LM91	Tetraspanin. (400 aa)
	A0A090LNT2	Gp150 protein. (888 aa)
	A0A090LRG3	Collagen alpha-5(IV) chain. (373 aa)
	A0A090LTM7	D-glucuronyl C5-epimerase. (572 aa)
	A0A090LUH8	Tetraspanin. (303 aa)
	A0A090MUS8	Karst. (4015 aa)
	A0A090MWL1	tRNA dimethylallyltransferase, mitochondrial; Belongs to the IPP transferase family. (410 aa)
	A0A090MWL5	Histone-lysine N-methyltransferase ASH1L. (1424 aa)
	A0A090MWW7	Mothers against decapentaplegic homolog. (443 aa)
	A0A090MX12	Insulin-like growth factor 1 receptor. (1363 aa)
	A0A090MX41	Basic-leucine zipper domain-containing protein. (679 aa)
	A0A090MXB4	Mitochondrial import inner membrane translocase subunit Tim10. (79 aa)
	A0A090MXN6	Uncharacterized protein. (154 aa)
	A0A090MYJ5	Beclin-1. (377 aa)
	A0A090MYP9	Prohibitin. (272 aa)

Your Current Organism:

Strongyloides ratti

NCBI taxonomy Id: 34506
Other names: S. ratti

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A090L057	A0A090LAN2	GH04846p.	Autophagy-specific gene 1.	0.724
A0A090L057	A0A090MX12	GH04846p.	Insulin-like growth factor 1 receptor.	0.587
A0A090L091	A0A090L4M2	Frizzled domain-containing protein.	Maverick.	0.494
A0A090L091	A0A090LBI5	Frizzled domain-containing protein.	Megalin.	0.546
A0A090L091	A0A090MX12	Frizzled domain-containing protein.	Insulin-like growth factor 1 receptor.	0.400
A0A090L2C9	A0A090L7F9	Rim.	Protein TFG.	0.493
A0A090L2C9	A0A090LDR4	Rim.	Syntaxin-4.	0.999
A0A090L2C9	A0A090LJU9	Rim.	Belongs to the syntaxin family.	0.999
A0A090L2C9	A0A090LLN1	Rim.	Contactin.	0.491
A0A090L2C9	A0A090MUS8	Rim.	Karst.	0.610
A0A090L2C9	A0A090MX12	Rim.	Insulin-like growth factor 1 receptor.	0.485
A0A090L2C9	A0A090MZW0	Rim.	Intraflagellar transport protein 80 homolog.	0.764
A0A090L3C5	A0A090MXB4	Mitochondrial import inner membrane translocase subunit Tim9.	Mitochondrial import inner membrane translocase subunit Tim10.	0.999
A0A090L429	A0A090L4M1	annotation not available	Mothers against decapentaplegic homolog.	0.741
A0A090L429	A0A090L4M2	annotation not available	Maverick.	0.463
A0A090L429	A0A090LAN2	annotation not available	Autophagy-specific gene 1.	0.405
A0A090L429	A0A090LDD3	annotation not available	Mothers against decapentaplegic homolog.	0.748
A0A090L429	A0A090LDP1	annotation not available	Helix loop helix protein 106.	0.630
A0A090L429	A0A090MWW7	annotation not available	Mothers against decapentaplegic homolog.	0.741
A0A090L429	A0A090MX12	annotation not available	Insulin-like growth factor 1 receptor.	0.864