(12 nodes) Apical protein localization network (Strongyloides ratti)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A090MYG1	Drab5. (331 aa)
	A0A090LKE0	Clathrin heavy chain. (946 aa)
	A0A090LK51	AP-47; Belongs to the adaptor complexes medium subunit family. (479 aa)
	A0A090LJU6	Belongs to the adaptor complexes medium subunit family. (430 aa)
	A0A090L3Q9	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1692 aa)
	A0A090LFG4	Belongs to the adaptor complexes medium subunit family. (424 aa)
	A0A090L306	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (160 aa)
	A0A090L1Y4	AP-1 complex subunit gamma. (832 aa)
	A0A090KX11	Armadillo-like helical domain and Armadillo-type fold domain-containing protein. (2062 aa)
	A0A090MZF4	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (145 aa)
	A0A090MZ72	AP-47; Belongs to the adaptor complexes medium subunit family. (383 aa)
	A0A090MYX8	G-protein gamma-like domain-containing protein. (68 aa)

Your Current Organism:

Strongyloides ratti

NCBI taxonomy Id: 34506
Other names: S. ratti

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A090KX11	A0A090L1Y4	Armadillo-like helical domain and Armadillo-type fold domain-containing protein.	AP-1 complex subunit gamma.	0.803
A0A090KX11	A0A090L306	Armadillo-like helical domain and Armadillo-type fold domain-containing protein.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.483
A0A090KX11	A0A090LFG4	Armadillo-like helical domain and Armadillo-type fold domain-containing protein.	Belongs to the adaptor complexes medium subunit family.	0.506
A0A090KX11	A0A090LJU6	Armadillo-like helical domain and Armadillo-type fold domain-containing protein.	Belongs to the adaptor complexes medium subunit family.	0.506
A0A090KX11	A0A090LK51	Armadillo-like helical domain and Armadillo-type fold domain-containing protein.	AP-47; Belongs to the adaptor complexes medium subunit family.	0.506
A0A090KX11	A0A090MZ72	Armadillo-like helical domain and Armadillo-type fold domain-containing protein.	AP-47; Belongs to the adaptor complexes medium subunit family.	0.506
A0A090KX11	A0A090MZF4	Armadillo-like helical domain and Armadillo-type fold domain-containing protein.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.483
A0A090L1Y4	A0A090KX11	AP-1 complex subunit gamma.	Armadillo-like helical domain and Armadillo-type fold domain-containing protein.	0.803
A0A090L1Y4	A0A090L306	AP-1 complex subunit gamma.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.966
A0A090L1Y4	A0A090L3Q9	AP-1 complex subunit gamma.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.945
A0A090L1Y4	A0A090LFG4	AP-1 complex subunit gamma.	Belongs to the adaptor complexes medium subunit family.	0.956
A0A090L1Y4	A0A090LJU6	AP-1 complex subunit gamma.	Belongs to the adaptor complexes medium subunit family.	0.950
A0A090L1Y4	A0A090LK51	AP-1 complex subunit gamma.	AP-47; Belongs to the adaptor complexes medium subunit family.	0.956
A0A090L1Y4	A0A090LKE0	AP-1 complex subunit gamma.	Clathrin heavy chain.	0.945
A0A090L1Y4	A0A090MYG1	AP-1 complex subunit gamma.	Drab5.	0.724
A0A090L1Y4	A0A090MZ72	AP-1 complex subunit gamma.	AP-47; Belongs to the adaptor complexes medium subunit family.	0.956
A0A090L1Y4	A0A090MZF4	AP-1 complex subunit gamma.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.966
A0A090L306	A0A090KX11	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	Armadillo-like helical domain and Armadillo-type fold domain-containing protein.	0.483
A0A090L306	A0A090L1Y4	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	AP-1 complex subunit gamma.	0.966
A0A090L306	A0A090L3Q9	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.741