(38 nodes) Embryonic organ development network (Strongyloides ratti)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A090LKZ9	Protein wntless homolog. (543 aa)
	A0A090LIP6	26S proteasome non-ATPase regulatory subunit 14. (528 aa)
	A0A090LHI5	Histone-binding protein RBBP7. (426 aa)
	A0A090LFS8	Pre-B-cell leukemia transcription factor 4. (336 aa)
	A0A090LFB5	Pre-B-cell leukemia transcription factor 4. (339 aa)
	A0A090LEB1	Regulator of nonsense transcripts 1. (1015 aa)
	A0A090LE23	Tyrosine-protein kinase. (568 aa)
	A0A090LDS6	Ubiquitin-conjugating enzyme E2 L3; Belongs to the ubiquitin-conjugating enzyme family. (156 aa)
	A0A090LDP5	Coiled-coil domain-containing protein 134 family-containing protein. (216 aa)
	A0A090LDF9	Membrane-associated protein Hem. (1138 aa)
	A0A090LCQ2	Uncharacterized protein. (384 aa)
	A0A090LCC5	Retinoblastoma family protein. (698 aa)
	A0A090LB68	annotation not available (5165 aa)
	A0A090LA11	annotation not available (550 aa)
	A0A090L9C6	Telomerase-binding protein EST1A. (1322 aa)
	A0A090L8D3	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (443 aa)
	A0A090L8A3	Uncharacterized protein. (522 aa)
	A0A090L894	WASp. (434 aa)
	A0A090L7X0	MIP02973p. (519 aa)
	A0A090L7B8	annotation not available (767 aa)
	A0A090L4D0	Uridine 5'-monophosphate synthase. (469 aa)
	A0A090L3Y0	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (338 aa)
	A0A090L3F5	annotation not available (782 aa)
	A0A090L1H5	Frizzled-4; Belongs to the G-protein coupled receptor Fz/Smo family. (557 aa)
	A0A090L1H2	Protein LIN37 family-containing protein. (248 aa)
	A0A090L091	Frizzled domain-containing protein. (1369 aa)
	A0A090KXW1	Zinc finger, C2H2 domain and Zinc finger, C2H2-like domain-containing protein. (799 aa)
	A0A090LM71	TEA/ATTS family-containing protein. (439 aa)
	A0A090MYZ0	Transmembrane protein 147. (145 aa)
	A0A090MYX8	G-protein gamma-like domain-containing protein. (68 aa)
	A0A090MXN6	Uncharacterized protein. (154 aa)
	A0A090MWL5	Histone-lysine N-methyltransferase ASH1L. (1424 aa)
	A0A090MUA5	Homeotic protein ocelliless. (334 aa)
	A0A090LP80	Brahma associated protein 170kD. (1057 aa)
	A0A090LNI3	Zinc finger, C2H2 domain and Zinc finger, C2H2-like domain-containing protein. (729 aa)
	A0A090LN04	Pre-B-cell leukemia transcription factor 4. (251 aa)
	A0A090LMH2	FCH domain and SH3 domain-containing protein. (611 aa)
	A0A090LM92	Transcription initiation factor TFIID subunit 10. (134 aa)

Your Current Organism:

Strongyloides ratti

NCBI taxonomy Id: 34506
Other names: S. ratti

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A090KXW1	A0A090L8D3	Zinc finger, C2H2 domain and Zinc finger, C2H2-like domain-containing protein.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.583
A0A090KXW1	A0A090LB68	Zinc finger, C2H2 domain and Zinc finger, C2H2-like domain-containing protein.	annotation not available	0.482
A0A090KXW1	A0A090LDS6	Zinc finger, C2H2 domain and Zinc finger, C2H2-like domain-containing protein.	Ubiquitin-conjugating enzyme E2 L3; Belongs to the ubiquitin-conjugating enzyme family.	0.534
A0A090KXW1	A0A090LHI5	Zinc finger, C2H2 domain and Zinc finger, C2H2-like domain-containing protein.	Histone-binding protein RBBP7.	0.675
A0A090KXW1	A0A090LM71	Zinc finger, C2H2 domain and Zinc finger, C2H2-like domain-containing protein.	TEA/ATTS family-containing protein.	0.433
A0A090KXW1	A0A090MWL5	Zinc finger, C2H2 domain and Zinc finger, C2H2-like domain-containing protein.	Histone-lysine N-methyltransferase ASH1L.	0.436
A0A090L091	A0A090L3Y0	Frizzled domain-containing protein.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.754
A0A090L091	A0A090L8A3	Frizzled domain-containing protein.	Uncharacterized protein.	0.400
A0A090L091	A0A090LCQ2	Frizzled domain-containing protein.	Uncharacterized protein.	0.483
A0A090L1H2	A0A090LCC5	Protein LIN37 family-containing protein.	Retinoblastoma family protein.	0.662
A0A090L1H2	A0A090LHI5	Protein LIN37 family-containing protein.	Histone-binding protein RBBP7.	0.880
A0A090L1H2	A0A090MXN6	Protein LIN37 family-containing protein.	Uncharacterized protein.	0.662
A0A090L1H5	A0A090L3Y0	Frizzled-4; Belongs to the G-protein coupled receptor Fz/Smo family.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.970
A0A090L1H5	A0A090L8A3	Frizzled-4; Belongs to the G-protein coupled receptor Fz/Smo family.	Uncharacterized protein.	0.400
A0A090L1H5	A0A090LE23	Frizzled-4; Belongs to the G-protein coupled receptor Fz/Smo family.	Tyrosine-protein kinase.	0.452
A0A090L3F5	A0A090L8D3	annotation not available	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.583
A0A090L3F5	A0A090LB68	annotation not available	annotation not available	0.482
A0A090L3F5	A0A090LDS6	annotation not available	Ubiquitin-conjugating enzyme E2 L3; Belongs to the ubiquitin-conjugating enzyme family.	0.534
A0A090L3F5	A0A090LHI5	annotation not available	Histone-binding protein RBBP7.	0.675
A0A090L3F5	A0A090LM71	annotation not available	TEA/ATTS family-containing protein.	0.433