(28 nodes) Regulation of neurogenesis network (Strongyloides ratti)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A090KZR3	Girdin. (1501 aa)
	A0A090L091	Frizzled domain-containing protein. (1369 aa)
	A0A090L280	T-lymphoma invasion and metastasis-inducing protein 1. (1060 aa)
	A0A090L477	Girdin. (252 aa)
	A0A090L552	Drebrin-like protein. (366 aa)
	A0A090L7H0	Belongs to the semaphorin family. (670 aa)
	A0A090L9C7	Uncharacterized protein. (550 aa)
	A0A090LB10	Fer3-like protein. (174 aa)
	A0A090LBE8	Ezrin. (590 aa)
	A0A090LEH5	Sema domain and WD40/YVTN repeat-like-containing domain-containing protein; Belongs to the semaphorin family. (759 aa)
	A0A090LEW9	Protein lin-9 homolog. (448 aa)
	A0A090LFJ3	Belongs to the semaphorin family. (693 aa)
	A0A090LFM7	GH07373p. (617 aa)
	A0A090LFT6	BHLH domain-containing protein. (217 aa)
	A0A090LG56	Proprotein convertase subtilisin/kexin type 4; Belongs to the peptidase S8 family. (721 aa)
	A0A090LLN1	Contactin. (1256 aa)
	A0A090LHW7	Fas apoptotic inhibitory molecule 1. (188 aa)
	A0A090LHH3	Transmembrane protein 98. (241 aa)
	A0A090N0Z8	Slit homolog 2 protein. (1478 aa)
	A0A090N0N1	Neuroglian. (820 aa)
	A0A090MYU4	Netrin receptor DCC. (1589 aa)
	A0A090MXY7	annotation not available (256 aa)
	A0A090MWY5	Kalirin. (1671 aa)
	A0A090MUV3	Protein atonal homolog 1. (204 aa)
	A0A090LU50	Sema domain-containing protein. (1929 aa)
	A0A090LTF7	GTX/Nkx6B-like homeodomain protein. (467 aa)
	A0A090LRY8	Neuroglian. (1345 aa)
	A0A090LPI9	Netrin receptor UNC5D. (1033 aa)

Your Current Organism:

Strongyloides ratti

NCBI taxonomy Id: 34506
Other names: S. ratti

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A090KZR3	A0A090L477	Girdin.	Girdin.	0.426
A0A090L280	A0A090LFM7	T-lymphoma invasion and metastasis-inducing protein 1.	GH07373p.	0.659
A0A090L280	A0A090MWY5	T-lymphoma invasion and metastasis-inducing protein 1.	Kalirin.	0.589
A0A090L477	A0A090KZR3	Girdin.	Girdin.	0.426
A0A090L7H0	A0A090LFJ3	Belongs to the semaphorin family.	Belongs to the semaphorin family.	0.498
A0A090L7H0	A0A090LU50	Belongs to the semaphorin family.	Sema domain-containing protein.	0.967
A0A090L9C7	A0A090LFM7	Uncharacterized protein.	GH07373p.	0.732
A0A090L9C7	A0A090LLN1	Uncharacterized protein.	Contactin.	0.498
A0A090L9C7	A0A090LRY8	Uncharacterized protein.	Neuroglian.	0.606
A0A090L9C7	A0A090N0N1	Uncharacterized protein.	Neuroglian.	0.606
A0A090LBE8	A0A090LLN1	Ezrin.	Contactin.	0.410
A0A090LBE8	A0A090LRY8	Ezrin.	Neuroglian.	0.524
A0A090LBE8	A0A090MYU4	Ezrin.	Netrin receptor DCC.	0.658
A0A090LBE8	A0A090N0N1	Ezrin.	Neuroglian.	0.524
A0A090LEH5	A0A090LU50	Sema domain and WD40/YVTN repeat-like-containing domain-containing protein; Belongs to the semaphorin family.	Sema domain-containing protein.	0.958
A0A090LFJ3	A0A090L7H0	Belongs to the semaphorin family.	Belongs to the semaphorin family.	0.498
A0A090LFJ3	A0A090LU50	Belongs to the semaphorin family.	Sema domain-containing protein.	0.970
A0A090LFM7	A0A090L280	GH07373p.	T-lymphoma invasion and metastasis-inducing protein 1.	0.659
A0A090LFM7	A0A090L9C7	GH07373p.	Uncharacterized protein.	0.732
A0A090LFM7	A0A090LG56	GH07373p.	Proprotein convertase subtilisin/kexin type 4; Belongs to the peptidase S8 family.	0.576