15 items (Strongyloides ratti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A090LN82	Clc protein-like family-containing protein. (309 aa)
	A0A090LKH7	Leucine rich repeat 5-containing protein. (415 aa)
	A0A090LGN3	Uncharacterized protein. (131 aa)
	A0A090LF44	annotation not available (501 aa)
	A0A090LDB7	annotation not available (1650 aa)
	A0A090LBZ8	Stromal interaction molecule homolog. (484 aa)
	A0A090LAE6	Syntrophin-like 1. (445 aa)
	A0A090L9Z8	Uncharacterized protein. (164 aa)
	A0A090MYF0	Cyclin-like domain-containing protein. (327 aa)
	A0A090LPH1	Clc protein-like family-containing protein. (273 aa)
	A0A090L1B6	Band 7 protein family and Stomatin family-containing protein. (290 aa)
	A0A090L8T4	Tetraspanin 97E. (207 aa)
	A0A090L2J8	PIH1 family-containing protein. (626 aa)
	A0A090N0T3	PMP-22/EMP/MP20/Claudin superfamily-containing protein. (284 aa)
	A0A090N0H8	annotation not available (390 aa)

Your Current Organism:

Strongyloides ratti

NCBI taxonomy Id: 34506
Other names: S. ratti

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A090LBZ8	A0A090LGN3	Stromal interaction molecule homolog.	Uncharacterized protein.	0.401
A0A090LF44	A0A090LKH7	annotation not available	Leucine rich repeat 5-containing protein.	0.496
A0A090LF44	A0A090N0T3	annotation not available	PMP-22/EMP/MP20/Claudin superfamily-containing protein.	0.439
A0A090LGN3	A0A090LBZ8	Uncharacterized protein.	Stromal interaction molecule homolog.	0.401
A0A090LKH7	A0A090LF44	Leucine rich repeat 5-containing protein.	annotation not available	0.496
A0A090LKH7	A0A090N0H8	Leucine rich repeat 5-containing protein.	annotation not available	0.496
A0A090N0H8	A0A090LKH7	annotation not available	Leucine rich repeat 5-containing protein.	0.496
A0A090N0H8	A0A090N0T3	annotation not available	PMP-22/EMP/MP20/Claudin superfamily-containing protein.	0.439
A0A090N0T3	A0A090LF44	PMP-22/EMP/MP20/Claudin superfamily-containing protein.	annotation not available	0.439
A0A090N0T3	A0A090N0H8	PMP-22/EMP/MP20/Claudin superfamily-containing protein.	annotation not available	0.439