10 items (Strongyloides ratti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A090KZK0	Uncharacterized protein. (78 aa)
	A0A090L365	Topoisomerase II-associated protein PAT1 family-containing protein. (677 aa)
	A0A090L754	U6 snRNA-associated Sm-like protein LSm1. (123 aa)
	A0A090L8K1	LSM14 domain-containing protein. (678 aa)
	A0A090LC45	M7GpppX diphosphatase. (295 aa)
	A0A090LI33	M7GpppN-mRNA hydrolase. (163 aa)
	A0A090LJ31	Decapping protein 1. (298 aa)
	A0A090LL84	WD40/YVTN repeat-like-containing domain and WD40-repeat-containing domain-containing protein. (889 aa)
	A0A090LNP8	M7GpppN-mRNA hydrolase. (514 aa)
	A0A090MYC8	U6 snRNA-associated Sm-like protein LSm1. (123 aa)

Your Current Organism:

Strongyloides ratti

NCBI taxonomy Id: 34506
Other names: S. ratti

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A090KZK0	A0A090L754	Uncharacterized protein.	U6 snRNA-associated Sm-like protein LSm1.	0.915
A0A090KZK0	A0A090LI33	Uncharacterized protein.	M7GpppN-mRNA hydrolase.	0.913
A0A090KZK0	A0A090LJ31	Uncharacterized protein.	Decapping protein 1.	0.927
A0A090KZK0	A0A090LL84	Uncharacterized protein.	WD40/YVTN repeat-like-containing domain and WD40-repeat-containing domain-containing protein.	0.916
A0A090KZK0	A0A090LNP8	Uncharacterized protein.	M7GpppN-mRNA hydrolase.	0.913
A0A090KZK0	A0A090MYC8	Uncharacterized protein.	U6 snRNA-associated Sm-like protein LSm1.	0.915
A0A090L365	A0A090L754	Topoisomerase II-associated protein PAT1 family-containing protein.	U6 snRNA-associated Sm-like protein LSm1.	0.960
A0A090L365	A0A090LI33	Topoisomerase II-associated protein PAT1 family-containing protein.	M7GpppN-mRNA hydrolase.	0.949
A0A090L365	A0A090LJ31	Topoisomerase II-associated protein PAT1 family-containing protein.	Decapping protein 1.	0.966
A0A090L365	A0A090LL84	Topoisomerase II-associated protein PAT1 family-containing protein.	WD40/YVTN repeat-like-containing domain and WD40-repeat-containing domain-containing protein.	0.965
A0A090L365	A0A090LNP8	Topoisomerase II-associated protein PAT1 family-containing protein.	M7GpppN-mRNA hydrolase.	0.958
A0A090L365	A0A090MYC8	Topoisomerase II-associated protein PAT1 family-containing protein.	U6 snRNA-associated Sm-like protein LSm1.	0.960
A0A090L754	A0A090KZK0	U6 snRNA-associated Sm-like protein LSm1.	Uncharacterized protein.	0.915
A0A090L754	A0A090L365	U6 snRNA-associated Sm-like protein LSm1.	Topoisomerase II-associated protein PAT1 family-containing protein.	0.960
A0A090L754	A0A090LI33	U6 snRNA-associated Sm-like protein LSm1.	M7GpppN-mRNA hydrolase.	0.841
A0A090L754	A0A090LJ31	U6 snRNA-associated Sm-like protein LSm1.	Decapping protein 1.	0.821
A0A090L754	A0A090LL84	U6 snRNA-associated Sm-like protein LSm1.	WD40/YVTN repeat-like-containing domain and WD40-repeat-containing domain-containing protein.	0.741
A0A090L754	A0A090LNP8	U6 snRNA-associated Sm-like protein LSm1.	M7GpppN-mRNA hydrolase.	0.841
A0A090L8K1	A0A090LI33	LSM14 domain-containing protein.	M7GpppN-mRNA hydrolase.	0.447
A0A090L8K1	A0A090LNP8	LSM14 domain-containing protein.	M7GpppN-mRNA hydrolase.	0.565