40 items (Strongyloides ratti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A090L3I2	annotation not available (408 aa)
	A0A090LLX1	Nipped-B protein. (2177 aa)
	A0A090LBW5	Alpha-ketoglutarate-dependent dioxygenase alkB homolog 4. (292 aa)
	A0A090LBI1	Uncharacterized protein. (472 aa)
	A0A090LAI7	E3 ubiquitin-protein ligase RBX1. (108 aa)
	A0A090L9S0	NEDD8-activating enzyme E1 catalytic subunit. (412 aa)
	A0A090L9L0	Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (543 aa)
	A0A090L8N1	NEDD8. (118 aa)
	A0A090L8E2	SAP domain and Zinc finger, MIZ-type domain-containing protein. (640 aa)
	A0A090L859	E3 ubiquitin-protein ligase UBR5. (2707 aa)
	A0A090L853	Histone-lysine N-methyltransferase. (334 aa)
	A0A090L788	Uncharacterized protein. (134 aa)
	A0A090L7F3	annotation not available (646 aa)
	A0A090L5W9	DNA polymerase eta. (585 aa)
	A0A090L542	LD34181p. (1004 aa)
	A0A090L4I3	Zinc finger, MIZ-type domain-containing protein. (368 aa)
	A0A090LE48	MIF4-like, type 1/2/3 domain and Armadillo-type fold domain-containing protein. (280 aa)
	A0A090LFT2	Enhancer of polycomb-like protein. (516 aa)
	A0A090LG13	annotation not available (437 aa)
	A0A090LGJ6	Nipped-B protein. (1394 aa)
	A0A090LGN2	Zinc finger, RING-type domain and Zinc finger, RING/FYVE/PHD-type domain-containing protein. (659 aa)
	A0A090LI74	UNC93-like protein MFSD11. (459 aa)
	A0A090LJ42	Uncharacterized protein. (338 aa)
	A0A090LK97	Uncharacterized protein. (496 aa)
	A0A090LC64	N-glycosylase/DNA lyase. (305 aa)
	A0A090LKN9	Serine/threonine-protein phosphatase 4 regulatory subunit 3. (1050 aa)
	A0A090LLF0	Zinc finger, RING-type domain and Zinc finger, RING/FYVE/PHD-type domain-containing protein. (608 aa)
	A0A090MZF1	Tyrosine-protein kinase. (1285 aa)
	A0A090MXY7	annotation not available (256 aa)
	A0A090MWH8	Fanconi anemia group J protein. (757 aa)
	A0A090MVU8	UNC93-like protein MFSD11. (438 aa)
	A0A090MU36	E3 ubiquitin-protein ligase TRIP12. (1951 aa)
	A0A090LV35	Wings apart-like protein homolog. (571 aa)
	A0A090LP80	Brahma associated protein 170kD. (1057 aa)
	A0A090LNC8	Uncharacterized protein. (506 aa)
	A0A090KYQ8	Zinc finger, MIZ-type domain-containing protein. (399 aa)
	A0A090KZT1	UPF0364 protein C6orf211. (414 aa)
	A0A090L0T6	UNC93-like protein MFSD11. (453 aa)
	A0A090L1F7	Zinc finger, MIZ-type domain-containing protein. (854 aa)
	A0A090L1N8	Fragile X mental retardation syndrome-related protein 1. (515 aa)

Your Current Organism:

Strongyloides ratti

NCBI taxonomy Id: 34506
Other names: S. ratti

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A090KYQ8	A0A090L5W9	Zinc finger, MIZ-type domain-containing protein.	DNA polymerase eta.	0.464
A0A090KYQ8	A0A090L8N1	Zinc finger, MIZ-type domain-containing protein.	NEDD8.	0.520
A0A090KYQ8	A0A090LAI7	Zinc finger, MIZ-type domain-containing protein.	E3 ubiquitin-protein ligase RBX1.	0.600
A0A090KYQ8	A0A090LBI1	Zinc finger, MIZ-type domain-containing protein.	Uncharacterized protein.	0.517
A0A090KYQ8	A0A090MWH8	Zinc finger, MIZ-type domain-containing protein.	Fanconi anemia group J protein.	0.433
A0A090L1F7	A0A090L5W9	Zinc finger, MIZ-type domain-containing protein.	DNA polymerase eta.	0.464
A0A090L1F7	A0A090L8N1	Zinc finger, MIZ-type domain-containing protein.	NEDD8.	0.520
A0A090L1F7	A0A090LAI7	Zinc finger, MIZ-type domain-containing protein.	E3 ubiquitin-protein ligase RBX1.	0.600
A0A090L1F7	A0A090LBI1	Zinc finger, MIZ-type domain-containing protein.	Uncharacterized protein.	0.517
A0A090L1F7	A0A090MWH8	Zinc finger, MIZ-type domain-containing protein.	Fanconi anemia group J protein.	0.433
A0A090L3I2	A0A090L8N1	annotation not available	NEDD8.	0.664
A0A090L3I2	A0A090L9S0	annotation not available	NEDD8-activating enzyme E1 catalytic subunit.	0.440
A0A090L3I2	A0A090LBI1	annotation not available	Uncharacterized protein.	0.664
A0A090L3I2	A0A090MU36	annotation not available	E3 ubiquitin-protein ligase TRIP12.	0.533
A0A090L4I3	A0A090L5W9	Zinc finger, MIZ-type domain-containing protein.	DNA polymerase eta.	0.464
A0A090L4I3	A0A090L8N1	Zinc finger, MIZ-type domain-containing protein.	NEDD8.	0.520
A0A090L4I3	A0A090LAI7	Zinc finger, MIZ-type domain-containing protein.	E3 ubiquitin-protein ligase RBX1.	0.600
A0A090L4I3	A0A090LBI1	Zinc finger, MIZ-type domain-containing protein.	Uncharacterized protein.	0.517
A0A090L4I3	A0A090MWH8	Zinc finger, MIZ-type domain-containing protein.	Fanconi anemia group J protein.	0.433
A0A090L542	A0A090LGJ6	LD34181p.	Nipped-B protein.	0.963