STRINGSTRING
A0A090LQJ8 A0A090LQJ8 A0A090LQF6 A0A090LQF6 A0A090LQ23 A0A090LQ23 A0A090LPB5 A0A090LPB5 A0A090LP41 A0A090LP41 A0A090LMV4 A0A090LMV4 A0A090LMF4 A0A090LMF4 A0A090LM94 A0A090LM94 A0A090LLA1 A0A090LLA1 A0A090LL67 A0A090LL67 A0A090LKF4 A0A090LKF4 A0A090LK81 A0A090LK81 A0A090LIB3 A0A090LIB3 A0A090LI37 A0A090LI37 A0A090LHS6 A0A090LHS6 A0A090LH03 A0A090LH03 A0A090LGY3 A0A090LGY3 A0A090LGK2 A0A090LGK2 A0A090LGJ1 A0A090LGJ1 A0A090LG15 A0A090LG15 A0A090LFX8 A0A090LFX8 A0A090LFU6 A0A090LFU6 A0A090LFU1 A0A090LFU1 A0A090LFT3 A0A090LFT3 A0A090LFQ8 A0A090LFQ8 A0A090LFL5 A0A090LFL5 A0A090LFI5 A0A090LFI5 A0A090LF89 A0A090LF89 A0A090LEV2 A0A090LEV2 A0A090LE29 A0A090LE29 A0A090LE02 A0A090LE02 A0A090LDP0 A0A090LDP0 A0A090LD14 A0A090LD14 A0A090LCU4 A0A090LCU4 A0A090LCM7 A0A090LCM7 A0A090LBD7 A0A090LBD7 A0A090LB56 A0A090LB56 A0A090LB16 A0A090LB16 A0A090LAR6 A0A090LAR6 A0A090LAQ1 A0A090LAQ1 A0A090LAG1 A0A090LAG1 A0A090LAC0 A0A090LAC0 A0A090L9W1 A0A090L9W1 A0A090L9H8 A0A090L9H8 A0A090L969 A0A090L969 A0A090L956 A0A090L956 A0A090L8K7 A0A090L8K7 A0A090L872 A0A090L872 A0A090L858 A0A090L858 A0A090L832 A0A090L832 A0A090L7P5 A0A090L7P5 A0A090L7K0 A0A090L7K0 A0A090L741 A0A090L741 A0A090L6Y7 A0A090L6Y7 A0A090L6U2 A0A090L6U2 A0A090L6R6 A0A090L6R6 A0A090L6J7 A0A090L6J7 A0A090L6A3 A0A090L6A3 A0A090L5T0 A0A090L5T0 A0A090L4K0 A0A090L4K0 A0A090L4A3 A0A090L4A3 A0A090L3Y5 A0A090L3Y5 A0A090L3U4 A0A090L3U4 A0A090L3G8 A0A090L3G8 A0A090L3D4 A0A090L3D4 A0A090L3C6 A0A090L3C6 A0A090L2K5 A0A090L2K5 A0A090L2F4 A0A090L2F4 A0A090L1J5 A0A090L1J5 A0A090L1G4 A0A090L1G4 A0A090L197 A0A090L197 A0A090L045 A0A090L045 A0A090KZK5 A0A090KZK5 A0A090KXL2 A0A090KXL2 A0A090MZQ0 A0A090MZQ0 A0A090MZK2 A0A090MZK2 A0A090MZB5 A0A090MZB5 A0A090MYW5 A0A090MYW5 A0A090MY91 A0A090MY91 A0A090MY83 A0A090MY83 A0A090MXP2 A0A090MXP2 A0A090MXE6 A0A090MXE6 A0A090MXC2 A0A090MXC2 A0A090MWQ3 A0A090MWQ3 A0A090MWN9 A0A090MWN9 A0A090MVY4 A0A090MVY4 A0A090MVX0 A0A090MVX0 A0A090MVU6 A0A090MVU6 A0A090MV02 A0A090MV02 A0A090MU53 A0A090MU53 A0A090MU43 A0A090MU43 A0A090MTT1 A0A090MTT1 A0A090LRX8 A0A090LRX8 A0A090LQT6 A0A090LQT6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A090LQJ8rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (289 aa)
A0A090LQF6Uncharacterized protein. (341 aa)
A0A090LQ23FI04781p. (482 aa)
A0A090LPB5Surfeit locus protein 6. (328 aa)
A0A090LP41Small-subunit processome, Utp12 domain-containing protein. (347 aa)
A0A090LMV4Periodic tryptophan protein 1 homolog. (476 aa)
A0A090LMF4DNA/RNA-binding protein KIN17. (373 aa)
A0A090LM94LD15481p. (273 aa)
A0A090LLA1Mitochondrial ribosome-associated GTPase 2. (381 aa)
A0A090LL67Proliferation-associated protein 2G4. (384 aa)
A0A090LKF4Nucleolar protein 58. (460 aa)
A0A090LK81Uncharacterized protein. (115 aa)
A0A090LIB3PRKR-interacting protein 1. (161 aa)
A0A090LI37Uncharacterized protein. (345 aa)
A0A090LHS6annotation not available (1641 aa)
A0A090LH03DNA excision repair protein ERCC-6. (1042 aa)
A0A090LGY3DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] (702 aa)
A0A090LGK2Ubiquitin carboxyl-terminal hydrolase 36. (719 aa)
A0A090LGJ1annotation not available (255 aa)
A0A090LG15Lethal (2) 09851. (501 aa)
A0A090LFX8Probable ATP-dependent RNA helicase DDX27. (260 aa)
A0A090LFU65'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Plays a role in maintenance of steady-state concentration and turnover of microRNAs (miRNA) by degradation of mature miRNA. Degradation role is enhanced when in complex with paxt-1. Partially redundant to xrn-1 in miRNA guide strand degradation. Implicated in differential regulation of mRNAs such as let-7 by controlling the accumulation of mature miRNA. Positively regulates molting of the pharyngeal cuticle. (858 aa)
A0A090LFU15'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Plays a role in maintenance of steady-state concentration and turnover of microRNAs (miRNA) by degradation of mature miRNA. Degradation role is enhanced when in complex with paxt-1. Partially redundant to xrn-1 in miRNA guide strand degradation. Implicated in differential regulation of mRNAs such as let-7 by controlling the accumulation of mature miRNA. Positively regulates molting of the pharyngeal cuticle. (944 aa)
A0A090LFT3Cirhin. (662 aa)
A0A090LFQ8Ribonucleases P/MRP protein subunit POP1. (769 aa)
A0A090LFL5ATP-dependent RNA helicase DDX55; Belongs to the DEAD box helicase family. (587 aa)
A0A090LFI5annotation not available (907 aa)
A0A090LF89H/ACA ribonucleoprotein complex subunit 4. (438 aa)
A0A090LEV2Uncharacterized protein. (192 aa)
A0A090LE29DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (147 aa)
A0A090LE02Digestive organ expansion factor homolog. (632 aa)
A0A090LDP0Cell division control protein 6 homolog. (377 aa)
A0A090LD14Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (191 aa)
A0A090LCU4SRP40, C-terminal domain-containing protein. (1181 aa)
A0A090LCM7Guanine nucleotide-binding protein-like 3-like protein. (567 aa)
A0A090LBD7RNA polymerase I-specific transcription initiation factor RRN3. (525 aa)
A0A090LB56DNA polymerase V family and Armadillo-type fold domain-containing protein. (916 aa)
A0A090LB16H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (203 aa)
A0A090LAR660S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (509 aa)
A0A090LAQ1HAD hydrolase, subfamily IA and HAD-like domain-containing protein. (233 aa)
A0A090LAG1Protein AATF. (480 aa)
A0A090LAC0Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). Belongs to the eIF-2B alpha/beta/delta subunits family. MtnA subfamily. (441 aa)
A0A090L9W1Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
A0A090L9H8LRAT domain-containing protein. (325 aa)
A0A090L969Uncharacterized protein. (96 aa)
A0A090L956annotation not available (503 aa)
A0A090L8K7DNA-directed RNA polymerases I, II, and III subunit RPABC2. (128 aa)
A0A090L872H/ACA ribonucleoprotein complex subunit 2. (161 aa)
A0A090L858Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (78 aa)
A0A090L832U3 small nucleolar RNA-associated protein 15 homolog. (546 aa)
A0A090L7P5WD repeat domain 55. (331 aa)
A0A090L7K0Uncharacterized protein. (131 aa)
A0A090L741RNA-binding protein 28. (549 aa)
A0A090L6Y7Ribosome biogenesis protein NSA2 homolog. (199 aa)
A0A090L6U240S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
A0A090L6R6Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. (149 aa)
A0A090L6J7Probable ATP-dependent RNA helicase DDX56. (555 aa)
A0A090L6A3Cysteine alpha-hairpin motif superfamily domain-containing protein. (158 aa)
A0A090L5T0DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1127 aa)
A0A090L4K0DNA-directed RNA polymerases I, II, and III subunit RPABC4. (58 aa)
A0A090L4A3Probable ATP-dependent RNA helicase DDX47; Belongs to the DEAD box helicase family. (483 aa)
A0A090L3Y5Armadillo-type fold domain-containing protein. (1159 aa)
A0A090L3U4U3 small nucleolar ribonucleoprotein protein IMP3. (168 aa)
A0A090L3G8U3 small nucleolar RNA-associated protein 6 homolog. (585 aa)
A0A090L3D4DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1738 aa)
A0A090L3C6DNA excision repair protein ERCC-6. (291 aa)
A0A090L2K5Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. (806 aa)
A0A090L2F4Ribosome biogenesis protein Nop16 family-containing protein. (217 aa)
A0A090L1J5Putative tRNA pseudouridine synthase Pus10. (785 aa)
A0A090L1G4DNA-directed RNA polymerases I and III subunit RPAC1. (581 aa)
A0A090L197U3 small nucleolar RNA-interacting protein 2. (449 aa)
A0A090L045Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (648 aa)
A0A090KZK5Uncharacterized protein. (1239 aa)
A0A090KXL2Protein LOC81691. (700 aa)
A0A090MZQ0DNA-directed RNA polymerases I, II, and III subunit RPABC1. (192 aa)
A0A090MZK2DNA excision repair protein ERCC-6. (411 aa)
A0A090MZB5ATP-dependent RNA helicase DDX24. (567 aa)
A0A090MYW5Uncharacterized protein. (658 aa)
A0A090MY91Bcl2-like family and Blc2 family-containing protein. (227 aa)
A0A090MY83DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. (329 aa)
A0A090MXP2Ribosome production factor 2 homolog. (296 aa)
A0A090MXE6Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (441 aa)
A0A090MXC2U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (653 aa)
A0A090MWQ3Uncharacterized protein. (789 aa)
A0A090MWN9Nucleolar protein 10. (658 aa)
A0A090MVY4Selenium-binding protein 1. (474 aa)
A0A090MVX0Protein SDA1 homolog. (1009 aa)
A0A090MVU6DNA-directed RNA polymerases I, II, and III subunit RPABC5. (67 aa)
A0A090MV02Zinc finger, C2H2 domain and Zinc finger, C2H2-like domain-containing protein. (526 aa)
A0A090MU53Fibrillarin. (325 aa)
A0A090MU43Polynucleotide 5'-hydroxyl-kinase NOL9. (595 aa)
A0A090MTT1Putative methyltransferase NSUN5; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (682 aa)
A0A090LRX8Uncharacterized protein. (553 aa)
A0A090LQT6U3 small nucleolar ribonucleoprotein protein IMP4. (311 aa)
Your Current Organism:
Strongyloides ratti
NCBI taxonomy Id: 34506
Other names: S. ratti
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