14 items (Strongyloides ratti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A090L4R1	Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase MESH1. (200 aa)
	A0A090LC00	Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase MESH1. (220 aa)
	A0A090LJJ1	Ubiquitin-60S ribosomal protein L40. (116 aa)
	A0A090KX91	Ribosomal protein L20 family-containing protein. (189 aa)
	A0A090L2N9	Uncharacterized protein. (368 aa)
	A0A090L2R7	Twinkle protein, mitochondrial. (661 aa)
	A0A090LS66	Belongs to the chloride channel (TC 2.A.49) family. (881 aa)
	A0A090LS36	ShKT domain-containing protein. (237 aa)
	A0A090LQD7	Uncharacterized protein. (420 aa)
	A0A090LLK3	Endothelial differentiation-related factor 1. (148 aa)
	A0A090N0I7	Protein phosphatase 2C (PP2C)-like domain-containing protein. (798 aa)
	A0A090MYD3	Lissencephaly-1 homolog B. (161 aa)
	A0A090LKP9	Ubiquitin-60S ribosomal protein L40. (128 aa)
	A0A090L6X0	DnaJ homolog subfamily C member 25. (317 aa)

Your Current Organism:

Strongyloides ratti

NCBI taxonomy Id: 34506
Other names: S. ratti

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A090KX91	A0A090L4R1	Ribosomal protein L20 family-containing protein.	Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase MESH1.	0.846
A0A090KX91	A0A090LC00	Ribosomal protein L20 family-containing protein.	Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase MESH1.	0.846
A0A090KX91	A0A090MYD3	Ribosomal protein L20 family-containing protein.	Lissencephaly-1 homolog B.	0.902
A0A090L4R1	A0A090KX91	Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase MESH1.	Ribosomal protein L20 family-containing protein.	0.846
A0A090LC00	A0A090KX91	Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase MESH1.	Ribosomal protein L20 family-containing protein.	0.846
A0A090LJJ1	A0A090LLK3	Ubiquitin-60S ribosomal protein L40.	Endothelial differentiation-related factor 1.	0.721
A0A090LKP9	A0A090LLK3	Ubiquitin-60S ribosomal protein L40.	Endothelial differentiation-related factor 1.	0.721
A0A090LLK3	A0A090LJJ1	Endothelial differentiation-related factor 1.	Ubiquitin-60S ribosomal protein L40.	0.721
A0A090LLK3	A0A090LKP9	Endothelial differentiation-related factor 1.	Ubiquitin-60S ribosomal protein L40.	0.721
A0A090LLK3	A0A090LS36	Endothelial differentiation-related factor 1.	ShKT domain-containing protein.	0.721
A0A090LS36	A0A090LLK3	ShKT domain-containing protein.	Endothelial differentiation-related factor 1.	0.721
A0A090MYD3	A0A090KX91	Lissencephaly-1 homolog B.	Ribosomal protein L20 family-containing protein.	0.902