8 items (Strongyloides ratti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A090LCW0	RNA polymerase-associated protein LEO1. (413 aa)
	A0A090KXD4	RNA polymerase-associated protein Ctr9 homolog. (957 aa)
	A0A090LB30	Peroxisome biogenesis factor 2. (273 aa)
	A0A090L423	RNA polymerase-associated protein Ctr9 homolog. (1031 aa)
	A0A090KZL5	Parafibromin. (556 aa)
	A0A090MW43	RNA polymerase-associated protein RTF1 homolog. (550 aa)
	A0A090LRI9	Uncharacterized protein. (571 aa)
	A0A090KYZ7	RNA polymerase-associated protein Ctr9 homolog. (1042 aa)

Your Current Organism:

Strongyloides ratti

NCBI taxonomy Id: 34506
Other names: S. ratti

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A090KXD4	A0A090KZL5	RNA polymerase-associated protein Ctr9 homolog.	Parafibromin.	0.940
A0A090KXD4	A0A090LCW0	RNA polymerase-associated protein Ctr9 homolog.	RNA polymerase-associated protein LEO1.	0.999
A0A090KXD4	A0A090MW43	RNA polymerase-associated protein Ctr9 homolog.	RNA polymerase-associated protein RTF1 homolog.	0.922
A0A090KYZ7	A0A090KZL5	RNA polymerase-associated protein Ctr9 homolog.	Parafibromin.	0.940
A0A090KYZ7	A0A090LCW0	RNA polymerase-associated protein Ctr9 homolog.	RNA polymerase-associated protein LEO1.	0.999
A0A090KYZ7	A0A090MW43	RNA polymerase-associated protein Ctr9 homolog.	RNA polymerase-associated protein RTF1 homolog.	0.922
A0A090KZL5	A0A090KXD4	Parafibromin.	RNA polymerase-associated protein Ctr9 homolog.	0.940
A0A090KZL5	A0A090KYZ7	Parafibromin.	RNA polymerase-associated protein Ctr9 homolog.	0.940
A0A090KZL5	A0A090L423	Parafibromin.	RNA polymerase-associated protein Ctr9 homolog.	0.940
A0A090KZL5	A0A090LCW0	Parafibromin.	RNA polymerase-associated protein LEO1.	0.999
A0A090KZL5	A0A090MW43	Parafibromin.	RNA polymerase-associated protein RTF1 homolog.	0.998
A0A090L423	A0A090KZL5	RNA polymerase-associated protein Ctr9 homolog.	Parafibromin.	0.940
A0A090L423	A0A090LCW0	RNA polymerase-associated protein Ctr9 homolog.	RNA polymerase-associated protein LEO1.	0.999
A0A090L423	A0A090MW43	RNA polymerase-associated protein Ctr9 homolog.	RNA polymerase-associated protein RTF1 homolog.	0.922
A0A090LCW0	A0A090KXD4	RNA polymerase-associated protein LEO1.	RNA polymerase-associated protein Ctr9 homolog.	0.999
A0A090LCW0	A0A090KYZ7	RNA polymerase-associated protein LEO1.	RNA polymerase-associated protein Ctr9 homolog.	0.999
A0A090LCW0	A0A090KZL5	RNA polymerase-associated protein LEO1.	Parafibromin.	0.999
A0A090LCW0	A0A090L423	RNA polymerase-associated protein LEO1.	RNA polymerase-associated protein Ctr9 homolog.	0.999
A0A090LCW0	A0A090MW43	RNA polymerase-associated protein LEO1.	RNA polymerase-associated protein RTF1 homolog.	0.999
A0A090MW43	A0A090KXD4	RNA polymerase-associated protein RTF1 homolog.	RNA polymerase-associated protein Ctr9 homolog.	0.922