41 items (Strongyloides ratti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A090LA51	Serine/arginine repetitive matrix protein 2. (97 aa)
	A0A090L8C2	Transthyretin-like family-containing protein. (146 aa)
	A0A090L888	Phosphorylated adapter RNA export protein, RNA-binding domain-containing protein. (265 aa)
	A0A090L7N4	CIP29 protein. (262 aa)
	A0A090L788	Uncharacterized protein. (134 aa)
	A0A090L6L7	Speckle targeted PIP5K1A-regulated poly(A) polymerase. (851 aa)
	A0A090L5F7	SprT-like domain-containing protein. (465 aa)
	A0A090KX72	Symplekin. (998 aa)
	A0A090L1W7	annotation not available (464 aa)
	A0A090L405	Bruno-3. (666 aa)
	A0A090L5D4	RNA recognition motif domain and Nucleotide-binding, alpha-beta plait domain-containing protein. (324 aa)
	A0A090L5D2	Adenylate kinase isoenzyme 6 homolog; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. May have a role in nuclear energy homeostasis. Has also ATPase activity. Belongs to the adenylate kinase family. AK6 subfamily. (178 aa)
	A0A090N0I1	annotation not available (432 aa)
	A0A090N078	Protein FRG1 homolog. (268 aa)
	A0A090MZZ4	RNA recognition motif domain and Nucleotide-binding, alpha-beta plait domain-containing protein. (448 aa)
	A0A090MY83	DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. (329 aa)
	A0A090MXR0	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (723 aa)
	A0A090MXL9	Btz domain-containing protein. (426 aa)
	A0A090MXJ6	annotation not available (575 aa)
	A0A090MXE6	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (441 aa)
	A0A090MXD7	Survival of motor neuron-related-splicing factor 30. (201 aa)
	A0A090MXB9	annotation not available (572 aa)
	A0A090MX90	Uncharacterized protein. (130 aa)
	A0A090MWU2	annotation not available (462 aa)
	A0A090MVH2	Uncharacterized protein. (339 aa)
	A0A090MU53	Fibrillarin. (325 aa)
	A0A090LQ93	LD21120p. (284 aa)
	A0A090LQ87	Histone H4 transcription factor. (442 aa)
	A0A090LNK5	Transthyretin-like family-containing protein. (275 aa)
	A0A090LKY3	Tyrosyl-DNA phosphodiesterase 2. (340 aa)
	A0A090LKJ2	Uncharacterized protein. (627 aa)
	A0A090LKD6	Nucleolar complex protein 3 homolog. (777 aa)
	A0A090LK36	G-patch domain-containing protein. (750 aa)
	A0A090LIL6	annotation not available (457 aa)
	A0A090LF12	annotation not available (436 aa)
	A0A090LF11	Telomerase Cajal body protein 1. (408 aa)
	A0A090LEB2	Uncharacterized protein. (594 aa)
	A0A090LDT6	Homeotic protein antennapedia. (284 aa)
	A0A090LDC6	Zinc finger, RING-type domain and Zinc finger, RING/FYVE/PHD-type domain-containing protein. (614 aa)
	A0A090LD19	Serine/arginine-rich splicing factor 1. (295 aa)
	A0A090LB22	Polyglutamine-binding protein 1. (213 aa)

Your Current Organism:

Strongyloides ratti

NCBI taxonomy Id: 34506
Other names: S. ratti

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A090KX72	A0A090L788	Symplekin.	Uncharacterized protein.	0.503
A0A090KX72	A0A090LD19	Symplekin.	Serine/arginine-rich splicing factor 1.	0.828
A0A090KX72	A0A090LF12	Symplekin.	annotation not available	0.999
A0A090KX72	A0A090LKJ2	Symplekin.	Uncharacterized protein.	0.503
A0A090KX72	A0A090MVH2	Symplekin.	Uncharacterized protein.	0.633
A0A090KX72	A0A090MXB9	Symplekin.	annotation not available	0.503
A0A090KX72	A0A090MZZ4	Symplekin.	RNA recognition motif domain and Nucleotide-binding, alpha-beta plait domain-containing protein.	0.415
A0A090L1W7	A0A090LB22	annotation not available	Polyglutamine-binding protein 1.	0.654
A0A090L1W7	A0A090LIL6	annotation not available	annotation not available	0.636
A0A090L1W7	A0A090MVH2	annotation not available	Uncharacterized protein.	0.597
A0A090L405	A0A090L5D4	Bruno-3.	RNA recognition motif domain and Nucleotide-binding, alpha-beta plait domain-containing protein.	0.516
A0A090L5D4	A0A090L405	RNA recognition motif domain and Nucleotide-binding, alpha-beta plait domain-containing protein.	Bruno-3.	0.516
A0A090L5D4	A0A090N0I1	RNA recognition motif domain and Nucleotide-binding, alpha-beta plait domain-containing protein.	annotation not available	0.727
A0A090L6L7	A0A090LIL6	Speckle targeted PIP5K1A-regulated poly(A) polymerase.	annotation not available	0.705
A0A090L6L7	A0A090MZZ4	Speckle targeted PIP5K1A-regulated poly(A) polymerase.	RNA recognition motif domain and Nucleotide-binding, alpha-beta plait domain-containing protein.	0.458
A0A090L788	A0A090KX72	Uncharacterized protein.	Symplekin.	0.503
A0A090L788	A0A090LD19	Uncharacterized protein.	Serine/arginine-rich splicing factor 1.	0.423
A0A090L788	A0A090LF12	Uncharacterized protein.	annotation not available	0.637
A0A090L788	A0A090MVH2	Uncharacterized protein.	Uncharacterized protein.	0.578
A0A090L788	A0A090MWU2	Uncharacterized protein.	annotation not available	0.455