41 items (Strongyloides ratti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A090MY05	WD40/YVTN repeat-like-containing domain and WD40-repeat-containing domain-containing protein. (306 aa)
	A0A090MYX0	Cullin-4A; Belongs to the cullin family. (883 aa)
	A0A090MZJ1	Zinc finger, C3HC-like domain-containing protein. (285 aa)
	A0A090MZP4	Cullin-5; Belongs to the cullin family. (1259 aa)
	A0A090MZU0	Anaphase-promoting complex subunit 10. (207 aa)
	A0A090N0L4	Fizzy/cell division cycle 20 related 1. (532 aa)
	A0A090KWE5	Zinc finger, SWIM-type domain-containing protein. (1571 aa)
	A0A090KYD5	RING-box protein 2. (194 aa)
	A0A090L216	Kelch repeat type 1 and Kelch-type beta propeller domain-containing protein. (405 aa)
	A0A090KZR7	CULT domain-containing protein. (157 aa)
	A0A090KYS9	Fizzy/cell division cycle 20 related 1. (526 aa)
	A0A090L283	Kelch-type beta propeller domain-containing protein. (453 aa)
	A0A090L2K6	RING-box protein 2. (107 aa)
	A0A090L3I5	Belongs to the SKP1 family. (155 aa)
	A0A090L4N1	Nrf2-associated protein keap1b. (545 aa)
	A0A090L4S7	Cell division cycle protein 20 homolog. (500 aa)
	A0A090L667	Uncharacterized protein. (795 aa)
	A0A090L6C8	CULT domain-containing protein. (712 aa)
	A0A090L709	Programmed cell death protein 6. (178 aa)
	A0A090L7P7	Epoxide hydrolase. (458 aa)
	A0A090L8D8	Anaphase-promoting complex subunit 2; Belongs to the cullin family. (742 aa)
	A0A090L8G8	DDB1-and CUL4-associated factor 13. (456 aa)
	A0A090LAI7	E3 ubiquitin-protein ligase RBX1. (108 aa)
	A0A090LB73	Cullin 1a; Belongs to the cullin family. (778 aa)
	A0A090LDD9	Cullin, N-terminal domain and Cullin repeat-like-containing domain-containing protein; Belongs to the cullin family. (277 aa)
	A0A090LE34	Cell division cycle protein 27 homolog. (812 aa)
	A0A090LF32	annotation not available (571 aa)
	A0A090LFS7	Uncharacterized protein. (479 aa)
	A0A090LG88	Cell division cycle protein 16 homolog. (678 aa)
	A0A090LI62	60 kDa lysophospholipase. (722 aa)
	A0A090LI65	F-box domain-containing protein. (374 aa)
	A0A090LKI2	annotation not available (895 aa)
	A0A090LKK1	Cullin 1a; Belongs to the cullin family. (784 aa)
	A0A090LMH1	Uncharacterized protein. (236 aa)
	A0A090LUC9	F-box domain-containing protein. (622 aa)
	A0A090MWQ0	Belongs to the SKP1 family. (656 aa)
	A0A090MWZ1	Kelch repeat type 1 and Kelch-type beta propeller domain-containing protein. (366 aa)
	A0A090MXW6	Cullin 1a; Belongs to the cullin family. (444 aa)
	A0A090MXY1	Inhibitor of growth protein. (429 aa)
	A0A090MXY2	Cell division cycle protein 23 homolog. (608 aa)
	A0A090MYA6	Programmed cell death protein 6. (183 aa)

Your Current Organism:

Strongyloides ratti

NCBI taxonomy Id: 34506
Other names: S. ratti

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A090KWE5	A0A090LAI7	Zinc finger, SWIM-type domain-containing protein.	E3 ubiquitin-protein ligase RBX1.	0.579
A0A090KWE5	A0A090LB73	Zinc finger, SWIM-type domain-containing protein.	Cullin 1a; Belongs to the cullin family.	0.676
A0A090KYD5	A0A090KYS9	RING-box protein 2.	Fizzy/cell division cycle 20 related 1.	0.475
A0A090KYD5	A0A090KZR7	RING-box protein 2.	CULT domain-containing protein.	0.575
A0A090KYD5	A0A090L3I5	RING-box protein 2.	Belongs to the SKP1 family.	0.893
A0A090KYD5	A0A090L4N1	RING-box protein 2.	Nrf2-associated protein keap1b.	0.880
A0A090KYD5	A0A090L4S7	RING-box protein 2.	Cell division cycle protein 20 homolog.	0.475
A0A090KYD5	A0A090L667	RING-box protein 2.	Uncharacterized protein.	0.729
A0A090KYD5	A0A090L6C8	RING-box protein 2.	CULT domain-containing protein.	0.575
A0A090KYD5	A0A090L8D8	RING-box protein 2.	Anaphase-promoting complex subunit 2; Belongs to the cullin family.	0.779
A0A090KYD5	A0A090L8G8	RING-box protein 2.	DDB1-and CUL4-associated factor 13.	0.641
A0A090KYD5	A0A090LAI7	RING-box protein 2.	E3 ubiquitin-protein ligase RBX1.	0.739
A0A090KYD5	A0A090LB73	RING-box protein 2.	Cullin 1a; Belongs to the cullin family.	0.949
A0A090KYD5	A0A090LDD9	RING-box protein 2.	Cullin, N-terminal domain and Cullin repeat-like-containing domain-containing protein; Belongs to the cullin family.	0.850
A0A090KYD5	A0A090LE34	RING-box protein 2.	Cell division cycle protein 27 homolog.	0.747
A0A090KYD5	A0A090LF32	RING-box protein 2.	annotation not available	0.608
A0A090KYD5	A0A090LG88	RING-box protein 2.	Cell division cycle protein 16 homolog.	0.643
A0A090KYD5	A0A090LI65	RING-box protein 2.	F-box domain-containing protein.	0.646
A0A090KYD5	A0A090LKK1	RING-box protein 2.	Cullin 1a; Belongs to the cullin family.	0.850
A0A090KYD5	A0A090LUC9	RING-box protein 2.	F-box domain-containing protein.	0.732