10 items (Strongyloides ratti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A090MVE7	Uncharacterized protein. (196 aa)
	A0A090L2U8	TMC family-containing protein. (1513 aa)
	A0A090L3E9	Peripheral plasma membrane protein CASK. (436 aa)
	A0A090L5E5	PL48 domain-containing protein. (244 aa)
	A0A090L5U1	TMC family-containing protein. (1348 aa)
	A0A090L9F0	Engulfment/cell motility, ELMO domain-containing protein. (345 aa)
	A0A090L9L8	Cdc14. (400 aa)
	A0A090LFV3	annotation not available (1309 aa)
	A0A090LJ69	GH21964p. (335 aa)
	A0A090LUE1	Armadillo-like helical domain and Armadillo-type fold domain-containing protein. (1262 aa)

Your Current Organism:

Strongyloides ratti

NCBI taxonomy Id: 34506
Other names: S. ratti

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A090L2U8	A0A090L3E9	TMC family-containing protein.	Peripheral plasma membrane protein CASK.	0.650
A0A090L2U8	A0A090LFV3	TMC family-containing protein.	annotation not available	0.453
A0A090L3E9	A0A090L2U8	Peripheral plasma membrane protein CASK.	TMC family-containing protein.	0.650
A0A090L3E9	A0A090L5U1	Peripheral plasma membrane protein CASK.	TMC family-containing protein.	0.650
A0A090L3E9	A0A090LFV3	Peripheral plasma membrane protein CASK.	annotation not available	0.471
A0A090L3E9	A0A090MVE7	Peripheral plasma membrane protein CASK.	Uncharacterized protein.	0.650
A0A090L5U1	A0A090L3E9	TMC family-containing protein.	Peripheral plasma membrane protein CASK.	0.650
A0A090L5U1	A0A090LFV3	TMC family-containing protein.	annotation not available	0.453
A0A090LFV3	A0A090L2U8	annotation not available	TMC family-containing protein.	0.453
A0A090LFV3	A0A090L3E9	annotation not available	Peripheral plasma membrane protein CASK.	0.471
A0A090LFV3	A0A090L5U1	annotation not available	TMC family-containing protein.	0.453
A0A090LFV3	A0A090MVE7	annotation not available	Uncharacterized protein.	0.453
A0A090MVE7	A0A090L3E9	Uncharacterized protein.	Peripheral plasma membrane protein CASK.	0.650
A0A090MVE7	A0A090LFV3	Uncharacterized protein.	annotation not available	0.453