STRINGSTRING
A0A090L5D1 A0A090L5D1 LSM8 LSM8 A0A090MZ79 A0A090MZ79 A0A090MY90 A0A090MY90 A0A090MX77 A0A090MX77 A0A090MWE8 A0A090MWE8 A0A090LQ13 A0A090LQ13 LSM3 LSM3 A0A090LK60 A0A090LK60 A0A090LJP5 A0A090LJP5 A0A090LI89 A0A090LI89 A0A090LHQ1 A0A090LHQ1 A0A090LH16 A0A090LH16 A0A090LGT9 A0A090LGT9 LSM4 LSM4 A0A090LFU9 A0A090LFU9 A0A090LFG9 A0A090LFG9 A0A090LEK5 A0A090LEK5 A0A090LD46 A0A090LD46 A0A090LBT2 A0A090LBT2 A0A090LBE4 A0A090LBE4 A0A090LB43 A0A090LB43 A0A090LAL7 A0A090LAL7 A0A090LAI6 A0A090LAI6 A0A090L8I4 A0A090L8I4 A0A090L7Y9 A0A090L7Y9 A0A090L7H7 A0A090L7H7 A0A090L765 A0A090L765 A0A090L6Y4 A0A090L6Y4 A0A090L6G2 A0A090L6G2 A0A090L3E5 A0A090L3E5 A0A090L2S2 A0A090L2S2 A0A090KZY3 A0A090KZY3 A0A090KZU7 A0A090KZU7 A0A090KZS6 A0A090KZS6 A0A090KX81 A0A090KX81 A0A090KX24 A0A090KX24 A0A090KWR0 A0A090KWR0
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A090L5D1U2 small nuclear ribonucleoprotein A. (227 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (100 aa)
A0A090MZ79Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (191 aa)
A0A090MY90U6 snRNA-associated Sm-like protein LSm6; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (81 aa)
A0A090MX77PRP40 pre-mRNA processing factor 40 homolog A. (731 aa)
A0A090MWE8Novel protein similar to human splicing factor 3a, subunit 1, 120kD. (647 aa)
A0A090LQ13Uncharacterized protein. (296 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (100 aa)
A0A090LK60PTB/PI domain and Pleckstrin homology-like domain-containing protein. (295 aa)
A0A090LJP5U6 snRNA-associated Sm-like protein LSm2. (428 aa)
A0A090LI89Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (88 aa)
A0A090LHQ1Uncharacterized protein. (172 aa)
A0A090LH16HIV Tat-specific factor 1. (400 aa)
A0A090LGT9Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (118 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (134 aa)
A0A090LFU9Small nuclear ribonucleoprotein-associated protein B. (192 aa)
A0A090LFG9Pre-mRNA-processing-splicing factor 8. (2338 aa)
A0A090LEK5Small nuclear ribonucleoprotein G. (77 aa)
A0A090LD46Uncharacterized protein. (350 aa)
A0A090LBT2U6 snRNA-associated Sm-like protein LSm7. (108 aa)
A0A090LBE4CD2 antigen cytoplasmic tail-binding protein 2. (274 aa)
A0A090LB43Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (91 aa)
A0A090LAL7U1 small nuclear ribonucleoprotein 70 kDa. (180 aa)
A0A090LAI6annotation not available (341 aa)
A0A090L8I4PHF5-like family and Gamma-tubulin complex component protein family-containing protein. (931 aa)
A0A090L7Y9Zinc finger matrin-type protein 2. (201 aa)
A0A090L7H7U4/U6 small nuclear ribonucleoprotein Prp3. (500 aa)
A0A090L765annotation not available (1228 aa)
A0A090L6Y4U4/U6 small nuclear ribonucleoprotein Prp31. (524 aa)
A0A090L6G2Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (139 aa)
A0A090L3E5Splicing factor 3B subunit 3. (1205 aa)
A0A090L2S2UPF0692 protein C19orf54. (242 aa)
A0A090KZY3Pre-mRNA-processing factor 6. (929 aa)
A0A090KZU7Integrator complex subunit 3. (1112 aa)
A0A090KZS6Uncharacterized protein. (640 aa)
A0A090KX81U4/U6.U5 tri-snRNP-associated protein 2. (488 aa)
A0A090KX24Iron-sulfur cluster co-chaperone protein HscB, mitochondrial. (207 aa)
A0A090KWR0Splicing factor 3B subunit 6-like protein. (136 aa)
Your Current Organism:
Strongyloides ratti
NCBI taxonomy Id: 34506
Other names: S. ratti
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