37 items (Strongyloides ratti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A090LF20	Pachytene checkpoint protein 2 homolog. (403 aa)
	A0A090L6T3	ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial. (674 aa)
	A0A090L7F3	annotation not available (646 aa)
	A0A090L8Y8	Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. (542 aa)
	A0A090L9S9	Paraplegin. (737 aa)
	A0A090L9V5	Spastin; Belongs to the AAA ATPase family. (561 aa)
	A0A090LC44	BcDNA.GH02678; Belongs to the AAA ATPase family. (427 aa)
	A0A090KY71	Mitochondrial chaperone BCS1; Belongs to the AAA ATPase family. (434 aa)
	A0A090KWP7	annotation not available (555 aa)
	A0A090LDF6	Replication factor C subunit 5. (340 aa)
	A0A090L0Z0	Replication factor C subunit 4. (362 aa)
	A0A090L1R3	AAA family protein Bor. (595 aa)
	A0A090L2Z2	Peroxisome biogenesis factor 1; Belongs to the AAA ATPase family. (294 aa)
	A0A090L355	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family. (808 aa)
	A0A090L3B2	Belongs to the AAA ATPase family. (467 aa)
	A0A090L502	annotation not available (342 aa)
	A0A090N0I9	Belongs to the AAA ATPase family. (457 aa)
	A0A090N0A1	Belongs to the AAA ATPase family. (327 aa)
	A0A090MZR1	Spastin; Belongs to the AAA ATPase family. (438 aa)
	A0A090MYT9	ATP-dependent zinc metalloprotease YME1L1; Belongs to the AAA ATPase family. (630 aa)
	A0A090MYR1	Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family. (1179 aa)
	A0A090MXH8	Uncharacterized protein. (749 aa)
	A0A090MXH6	Belongs to the AAA ATPase family. (396 aa)
	A0A090LMA2	26S protease regulatory subunit S10B; Belongs to the AAA ATPase family. (392 aa)
	A0A090LLI9	annotation not available (1226 aa)
	A0A090LKF1	Replication factor C subunit 1. (1382 aa)
	A0A090LHP6	26S proteasome regulatory complex subunit p50; Belongs to the AAA ATPase family. (430 aa)
	A0A090LHD3	26S protease regulatory subunit 7; Belongs to the AAA ATPase family. (434 aa)
	A0A090LGZ5	Transitional endoplasmic reticulum ATPase. (745 aa)
	A0A090LFR1	RE01104p; Belongs to the AAA ATPase family. (423 aa)
	A0A090LFI3	Proteasome (Prosome, macropain) 26S subunit, ATPase, 5; Belongs to the AAA ATPase family. (414 aa)
	A0A090LE28	annotation not available (701 aa)
	A0A090LEX1	AFG3-like protein 2. (781 aa)
	A0A090KZU1	Transitional endoplasmic reticulum ATPase. (733 aa)
	A0A090LEX9	26S protease regulatory subunit 4; Belongs to the AAA ATPase family. (440 aa)
	A0A090L5A0	Replication factor C subunit 2. (329 aa)
	A0A090L5N4	Chromosome transmission fidelity protein 18 homolog. (816 aa)

Your Current Organism:

Strongyloides ratti

NCBI taxonomy Id: 34506
Other names: S. ratti

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A090KWP7	A0A090KZU1	annotation not available	Transitional endoplasmic reticulum ATPase.	0.970
A0A090KWP7	A0A090L0Z0	annotation not available	Replication factor C subunit 4.	0.423
A0A090KWP7	A0A090L3B2	annotation not available	Belongs to the AAA ATPase family.	0.588
A0A090KWP7	A0A090L5A0	annotation not available	Replication factor C subunit 2.	0.423
A0A090KWP7	A0A090L7F3	annotation not available	annotation not available	0.481
A0A090KWP7	A0A090LC44	annotation not available	BcDNA.GH02678; Belongs to the AAA ATPase family.	0.526
A0A090KWP7	A0A090LDF6	annotation not available	Replication factor C subunit 5.	0.423
A0A090KWP7	A0A090LEX9	annotation not available	26S protease regulatory subunit 4; Belongs to the AAA ATPase family.	0.588
A0A090KWP7	A0A090LFI3	annotation not available	Proteasome (Prosome, macropain) 26S subunit, ATPase, 5; Belongs to the AAA ATPase family.	0.588
A0A090KWP7	A0A090LFR1	annotation not available	RE01104p; Belongs to the AAA ATPase family.	0.592
A0A090KWP7	A0A090LHD3	annotation not available	26S protease regulatory subunit 7; Belongs to the AAA ATPase family.	0.588
A0A090KWP7	A0A090LHP6	annotation not available	26S proteasome regulatory complex subunit p50; Belongs to the AAA ATPase family.	0.592
A0A090KWP7	A0A090LKF1	annotation not available	Replication factor C subunit 1.	0.481
A0A090KWP7	A0A090LMA2	annotation not available	26S protease regulatory subunit S10B; Belongs to the AAA ATPase family.	0.592
A0A090KWP7	A0A090N0A1	annotation not available	Belongs to the AAA ATPase family.	0.588
A0A090KWP7	A0A090N0I9	annotation not available	Belongs to the AAA ATPase family.	0.588
A0A090KY71	A0A090L6T3	Mitochondrial chaperone BCS1; Belongs to the AAA ATPase family.	ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial.	0.668
A0A090KY71	A0A090LFR1	Mitochondrial chaperone BCS1; Belongs to the AAA ATPase family.	RE01104p; Belongs to the AAA ATPase family.	0.400
A0A090KY71	A0A090MXH8	Mitochondrial chaperone BCS1; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.499
A0A090KY71	A0A090MYR1	Mitochondrial chaperone BCS1; Belongs to the AAA ATPase family.	Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family.	0.665