14 items (Strongyloides ratti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A090LE74	Uncharacterized protein. (1499 aa)
	A0A090LHB2	Leucine-rich repeat flightless-interacting protein family-containing protein. (382 aa)
	A0A090LDP6	ATP-dependent RNA helicase DHX29. (1516 aa)
	A0A090LC08	NF-kappa-B inhibitor-interacting Ras-like protein. (427 aa)
	A0A090LC01	Ubiquitin-40S ribosomal protein S27a. (164 aa)
	A0A090LBL6	Probable ATP-dependent RNA helicase DDX41; Belongs to the DEAD box helicase family. (601 aa)
	A0A090L9A7	Double-strand break repair protein MRE11A; Belongs to the MRE11/RAD32 family. (541 aa)
	A0A090L4Z4	Uncharacterized protein. (1143 aa)
	A0A090KXE1	Helicase ATP-binding domain-containing protein. (985 aa)
	A0A090KXC5	Uncharacterized protein. (1161 aa)
	A0A090LS36	ShKT domain-containing protein. (237 aa)
	A0A090LKS8	Polyubiquitin-C. (610 aa)
	A0A090LKP9	Ubiquitin-60S ribosomal protein L40. (128 aa)
	A0A090LJJ1	Ubiquitin-60S ribosomal protein L40. (116 aa)

Your Current Organism:

Strongyloides ratti

NCBI taxonomy Id: 34506
Other names: S. ratti

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A090KXC5	A0A090LBL6	Uncharacterized protein.	Probable ATP-dependent RNA helicase DDX41; Belongs to the DEAD box helicase family.	0.650
A0A090KXC5	A0A090LDP6	Uncharacterized protein.	ATP-dependent RNA helicase DHX29.	0.714
A0A090KXE1	A0A090LBL6	Helicase ATP-binding domain-containing protein.	Probable ATP-dependent RNA helicase DDX41; Belongs to the DEAD box helicase family.	0.650
A0A090KXE1	A0A090LDP6	Helicase ATP-binding domain-containing protein.	ATP-dependent RNA helicase DHX29.	0.711
A0A090L4Z4	A0A090LBL6	Uncharacterized protein.	Probable ATP-dependent RNA helicase DDX41; Belongs to the DEAD box helicase family.	0.650
A0A090L4Z4	A0A090LDP6	Uncharacterized protein.	ATP-dependent RNA helicase DHX29.	0.711
A0A090L9A7	A0A090LC01	Double-strand break repair protein MRE11A; Belongs to the MRE11/RAD32 family.	Ubiquitin-40S ribosomal protein S27a.	0.744
A0A090L9A7	A0A090LJJ1	Double-strand break repair protein MRE11A; Belongs to the MRE11/RAD32 family.	Ubiquitin-60S ribosomal protein L40.	0.524
A0A090L9A7	A0A090LKP9	Double-strand break repair protein MRE11A; Belongs to the MRE11/RAD32 family.	Ubiquitin-60S ribosomal protein L40.	0.524
A0A090L9A7	A0A090LKS8	Double-strand break repair protein MRE11A; Belongs to the MRE11/RAD32 family.	Polyubiquitin-C.	0.745
A0A090L9A7	A0A090LS36	Double-strand break repair protein MRE11A; Belongs to the MRE11/RAD32 family.	ShKT domain-containing protein.	0.524
A0A090LBL6	A0A090KXC5	Probable ATP-dependent RNA helicase DDX41; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.650
A0A090LBL6	A0A090KXE1	Probable ATP-dependent RNA helicase DDX41; Belongs to the DEAD box helicase family.	Helicase ATP-binding domain-containing protein.	0.650
A0A090LBL6	A0A090L4Z4	Probable ATP-dependent RNA helicase DDX41; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.650
A0A090LBL6	A0A090LDP6	Probable ATP-dependent RNA helicase DDX41; Belongs to the DEAD box helicase family.	ATP-dependent RNA helicase DHX29.	0.787
A0A090LBL6	A0A090LE74	Probable ATP-dependent RNA helicase DDX41; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.650
A0A090LBL6	A0A090LHB2	Probable ATP-dependent RNA helicase DDX41; Belongs to the DEAD box helicase family.	Leucine-rich repeat flightless-interacting protein family-containing protein.	0.508
A0A090LBL6	A0A090LKS8	Probable ATP-dependent RNA helicase DDX41; Belongs to the DEAD box helicase family.	Polyubiquitin-C.	0.581
A0A090LC01	A0A090L9A7	Ubiquitin-40S ribosomal protein S27a.	Double-strand break repair protein MRE11A; Belongs to the MRE11/RAD32 family.	0.744
A0A090LC01	A0A090LDP6	Ubiquitin-40S ribosomal protein S27a.	ATP-dependent RNA helicase DHX29.	0.672