15 items (Strongyloides ratti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A090N0Q1	FI18025p1. (740 aa)
	A0A090KZB3	SoxNeuro. (327 aa)
	A0A090L344	High mobility group box domain-containing protein. (235 aa)
	A0A090L8S8	Protein pangolin. (439 aa)
	A0A090LC01	Ubiquitin-40S ribosomal protein S27a. (164 aa)
	A0A090LCE6	Sox100B. (350 aa)
	A0A090LD99	Armadillo-like helical domain and Armadillo-type fold domain-containing protein. (943 aa)
	A0A090LF79	Si:ch211-81i17.1. (674 aa)
	A0A090LJJ1	Ubiquitin-60S ribosomal protein L40. (116 aa)
	A0A090LKA2	Putative transcription factor SOX-14. (436 aa)
	A0A090LKP9	Ubiquitin-60S ribosomal protein L40. (128 aa)
	A0A090LKS8	Polyubiquitin-C. (610 aa)
	A0A090LS36	ShKT domain-containing protein. (237 aa)
	A0A090MW64	Exportin-1. (1065 aa)
	A0A090N004	High mobility group box domain-containing protein. (220 aa)

Your Current Organism:

Strongyloides ratti

NCBI taxonomy Id: 34506
Other names: S. ratti

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A090KZB3	A0A090L344	SoxNeuro.	High mobility group box domain-containing protein.	0.656
A0A090KZB3	A0A090L8S8	SoxNeuro.	Protein pangolin.	0.802
A0A090KZB3	A0A090LKA2	SoxNeuro.	Putative transcription factor SOX-14.	0.658
A0A090KZB3	A0A090N0Q1	SoxNeuro.	FI18025p1.	0.686
A0A090L344	A0A090KZB3	High mobility group box domain-containing protein.	SoxNeuro.	0.656
A0A090L344	A0A090L8S8	High mobility group box domain-containing protein.	Protein pangolin.	0.867
A0A090L344	A0A090LKA2	High mobility group box domain-containing protein.	Putative transcription factor SOX-14.	0.606
A0A090L344	A0A090N0Q1	High mobility group box domain-containing protein.	FI18025p1.	0.660
A0A090L8S8	A0A090KZB3	Protein pangolin.	SoxNeuro.	0.802
A0A090L8S8	A0A090L344	Protein pangolin.	High mobility group box domain-containing protein.	0.867
A0A090L8S8	A0A090LCE6	Protein pangolin.	Sox100B.	0.739
A0A090L8S8	A0A090LD99	Protein pangolin.	Armadillo-like helical domain and Armadillo-type fold domain-containing protein.	0.911
A0A090L8S8	A0A090LF79	Protein pangolin.	Si:ch211-81i17.1.	0.982
A0A090L8S8	A0A090LKA2	Protein pangolin.	Putative transcription factor SOX-14.	0.760
A0A090L8S8	A0A090N004	Protein pangolin.	High mobility group box domain-containing protein.	0.701
A0A090L8S8	A0A090N0Q1	Protein pangolin.	FI18025p1.	0.690
A0A090LC01	A0A090LF79	Ubiquitin-40S ribosomal protein S27a.	Si:ch211-81i17.1.	0.642
A0A090LC01	A0A090LJJ1	Ubiquitin-40S ribosomal protein S27a.	Ubiquitin-60S ribosomal protein L40.	0.984
A0A090LC01	A0A090LKP9	Ubiquitin-40S ribosomal protein S27a.	Ubiquitin-60S ribosomal protein L40.	0.984
A0A090LC01	A0A090LKS8	Ubiquitin-40S ribosomal protein S27a.	Polyubiquitin-C.	0.998