STRINGSTRING
A0A090KZK0 A0A090KZK0 A0A090L2S2 A0A090L2S2 A0A090L365 A0A090L365 A0A090L754 A0A090L754 A0A090LBT2 A0A090LBT2 LSM4 LSM4 A0A090LI33 A0A090LI33 A0A090LJ31 A0A090LJ31 A0A090LJP5 A0A090LJP5 A0A090LL84 A0A090LL84 A0A090LNP8 A0A090LNP8 LSM3 LSM3 A0A090MWW1 A0A090MWW1 A0A090MY90 A0A090MY90 A0A090MYC8 A0A090MYC8
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A090KZK0Uncharacterized protein. (78 aa)
A0A090L2S2UPF0692 protein C19orf54. (242 aa)
A0A090L365Topoisomerase II-associated protein PAT1 family-containing protein. (677 aa)
A0A090L754U6 snRNA-associated Sm-like protein LSm1. (123 aa)
A0A090LBT2U6 snRNA-associated Sm-like protein LSm7. (108 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (134 aa)
A0A090LI33M7GpppN-mRNA hydrolase. (163 aa)
A0A090LJ31Decapping protein 1. (298 aa)
A0A090LJP5U6 snRNA-associated Sm-like protein LSm2. (428 aa)
A0A090LL84WD40/YVTN repeat-like-containing domain and WD40-repeat-containing domain-containing protein. (889 aa)
A0A090LNP8M7GpppN-mRNA hydrolase. (514 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (100 aa)
A0A090MWW1Probable ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family. (433 aa)
A0A090MY90U6 snRNA-associated Sm-like protein LSm6; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (81 aa)
A0A090MYC8U6 snRNA-associated Sm-like protein LSm1. (123 aa)
Your Current Organism:
Strongyloides ratti
NCBI taxonomy Id: 34506
Other names: S. ratti
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