66 items (Strongyloides ratti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A090LKP9	Ubiquitin-60S ribosomal protein L40. (128 aa)
	A0A090LKB7	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (246 aa)
	A0A090LK28	Exosome complex component RRP46. (223 aa)
	A0A090LJJ1	Ubiquitin-60S ribosomal protein L40. (116 aa)
	A0A090LJ31	Decapping protein 1. (298 aa)
	A0A090LI33	M7GpppN-mRNA hydrolase. (163 aa)
	A0A090LHP6	26S proteasome regulatory complex subunit p50; Belongs to the AAA ATPase family. (430 aa)
	A0A090LHM9	Acidic leucine-rich nuclear phosphoprotein 32 family member A. (223 aa)
	A0A090LHD3	26S protease regulatory subunit 7; Belongs to the AAA ATPase family. (434 aa)
	A0A090LGV7	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (249 aa)
	A0A090LFR1	RE01104p; Belongs to the AAA ATPase family. (423 aa)
	A0A090LFK4	26S proteasome non-ATPase regulatory subunit 13. (394 aa)
	A0A090LFI3	Proteasome (Prosome, macropain) 26S subunit, ATPase, 5; Belongs to the AAA ATPase family. (414 aa)
	A0A090LFH3	Tim10/DDP family zinc finger domain-containing protein. (87 aa)
	A0A090LFF9	Exosome complex component RRP41. (258 aa)
	A0A090LC01	Ubiquitin-40S ribosomal protein S27a. (164 aa)
	A0A090LBP4	26S proteasome non-ATPase regulatory subunit 4. (377 aa)
	A0A090LAT2	Proteasome subunit beta; Belongs to the peptidase T1B family. (234 aa)
	A0A090LA19	26S proteasome non-ATPase regulatory subunit 11. (445 aa)
	A0A090L939	Proteasome subunit beta. (202 aa)
	A0A090L8J6	Exosome complex component RRP40. (237 aa)
	A0A090L8B5	Poly(A)-specific ribonuclease PARN. (645 aa)
	A0A090L6Z9	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (231 aa)
	A0A090L6V0	Proteasome subunit beta type-6. (234 aa)
	A0A090L6C6	26S proteasome non-ATPase regulatory subunit 5. (473 aa)
	A0A090L4Z3	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (255 aa)
	A0A090L4Y1	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (250 aa)
	A0A090L4G6	Cth1. (475 aa)
	A0A090L3M9	26S proteasome non-ATPase regulatory subunit 3. (508 aa)
	A0A090L3B9	annotation not available (428 aa)
	A0A090L2U7	Exosome complex component CSL4. (685 aa)
	A0A090L2I6	annotation not available (249 aa)
	A0A090L1P3	Uncharacterized protein. (242 aa)
	A0A090L0P8	Zinc finger, CCCH-type domain-containing protein. (254 aa)
	A0A090L0L9	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (262 aa)
	A0A090KZW3	Exosome complex component RRP45. (299 aa)
	A0A090KZ95	annotation not available (272 aa)
	A0A090KYC8	Nuclear pore complex protein Nup214. (1340 aa)
	A0A090KXW2	Cth1. (465 aa)
	A0A090KWT9	26S proteasome non-ATPase regulatory subunit 9. (198 aa)
	A0A090KWH2	Proteasome activator complex subunit 4B. (1892 aa)
	A0A090L105	Exosome complex component RRP42. (324 aa)
	A0A090N0I1	annotation not available (432 aa)
	A0A090MZL1	26S proteasome non-ATPase regulatory subunit 2; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S2 family. (929 aa)
	A0A090MZG4	26S proteasome non-ATPase regulatory subunit 12. (531 aa)
	A0A090MZ52	26S proteasome non-ATPase regulatory subunit 11. (408 aa)
	A0A090MYV9	26S proteasome non-ATPase regulatory subunit 8. (271 aa)
	A0A090MYM6	26S proteasome non-ATPase regulatory subunit 7. (350 aa)
	A0A090MYM3	Proteasome subunit beta. (205 aa)
	A0A090MYC9	Exosome complex component RRP4. (299 aa)
	A0A090MXH7	Acidic leucine-rich nuclear phosphoprotein 32 family member A. (221 aa)
	A0A090MX67	Uncharacterized protein. (307 aa)
	A0A090MWI9	Proteasome subunit beta type-11. (285 aa)
	A0A090MWC6	Proteasome subunit beta; Belongs to the peptidase T1B family. (232 aa)
	A0A090MW64	Exportin-1. (1065 aa)
	A0A090MW35	Proteasome activator complex subunit 4B. (1933 aa)
	A0A090MVL7	LD35640p. (603 aa)
	A0A090LSR3	annotation not available (904 aa)
	A0A090LSA0	Proteasome subunit beta. (249 aa)
	A0A090LS36	ShKT domain-containing protein. (237 aa)
	A0A090LP87	Cth1. (472 aa)
	A0A090LNT1	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (665 aa)
	A0A090LNP8	M7GpppN-mRNA hydrolase. (514 aa)
	A0A090LN11	Tristetraprolin. (325 aa)
	A0A090LMA2	26S protease regulatory subunit S10B; Belongs to the AAA ATPase family. (392 aa)
	A0A090LKS8	Polyubiquitin-C. (610 aa)

Your Current Organism:

Strongyloides ratti

NCBI taxonomy Id: 34506
Other names: S. ratti

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A090KWH2	A0A090KWT9	Proteasome activator complex subunit 4B.	26S proteasome non-ATPase regulatory subunit 9.	0.615
A0A090KWH2	A0A090KZ95	Proteasome activator complex subunit 4B.	annotation not available	0.917
A0A090KWH2	A0A090L0L9	Proteasome activator complex subunit 4B.	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.	0.931
A0A090KWH2	A0A090L1P3	Proteasome activator complex subunit 4B.	Uncharacterized protein.	0.797
A0A090KWH2	A0A090L3B9	Proteasome activator complex subunit 4B.	annotation not available	0.749
A0A090KWH2	A0A090L3M9	Proteasome activator complex subunit 4B.	26S proteasome non-ATPase regulatory subunit 3.	0.760
A0A090KWH2	A0A090L4Y1	Proteasome activator complex subunit 4B.	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.	0.945
A0A090KWH2	A0A090L4Z3	Proteasome activator complex subunit 4B.	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.	0.929
A0A090KWH2	A0A090L6V0	Proteasome activator complex subunit 4B.	Proteasome subunit beta type-6.	0.894
A0A090KWH2	A0A090L6Z9	Proteasome activator complex subunit 4B.	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.	0.943
A0A090KWH2	A0A090L939	Proteasome activator complex subunit 4B.	Proteasome subunit beta.	0.933
A0A090KWH2	A0A090LA19	Proteasome activator complex subunit 4B.	26S proteasome non-ATPase regulatory subunit 11.	0.695
A0A090KWH2	A0A090LAT2	Proteasome activator complex subunit 4B.	Proteasome subunit beta; Belongs to the peptidase T1B family.	0.931
A0A090KWH2	A0A090LBP4	Proteasome activator complex subunit 4B.	26S proteasome non-ATPase regulatory subunit 4.	0.944
A0A090KWH2	A0A090LC01	Proteasome activator complex subunit 4B.	Ubiquitin-40S ribosomal protein S27a.	0.615
A0A090KWH2	A0A090LFI3	Proteasome activator complex subunit 4B.	Proteasome (Prosome, macropain) 26S subunit, ATPase, 5; Belongs to the AAA ATPase family.	0.790
A0A090KWH2	A0A090LFK4	Proteasome activator complex subunit 4B.	26S proteasome non-ATPase regulatory subunit 13.	0.740
A0A090KWH2	A0A090LFR1	Proteasome activator complex subunit 4B.	RE01104p; Belongs to the AAA ATPase family.	0.786
A0A090KWH2	A0A090LGV7	Proteasome activator complex subunit 4B.	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.	0.927
A0A090KWH2	A0A090LHD3	Proteasome activator complex subunit 4B.	26S protease regulatory subunit 7; Belongs to the AAA ATPase family.	0.759