40 items (Strongyloides ratti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A090L3N6	Protein prenyltransferase, alpha subunit repeat-containing protein. (309 aa)
	A0A090L274	Spectrin alpha chain, erythrocytic 1. (2426 aa)
	A0A090L1Q1	Zinc finger, RING-type domain and Bcr-Abl oncoprotein oligomerisation domain-containing protein. (792 aa)
	A0A090KXU4	Histone H1.0. (221 aa)
	A0A090N0S1	GH13992p. (217 aa)
	A0A090N0H5	Dynein light chain. (129 aa)
	A0A090MZB0	Belongs to the intermediate filament family. (579 aa)
	A0A090MYU4	Netrin receptor DCC. (1589 aa)
	A0A090MY81	Lamin Tail Domain domain and Intermediate filament protein family-containing protein; Belongs to the intermediate filament family. (604 aa)
	A0A090MX84	Bent. (1262 aa)
	A0A090MWJ1	Programmed cell death 6-interacting protein. (883 aa)
	A0A090MV87	Methylthioribulose-1-phosphate dehydratase. (235 aa)
	A0A090MV07	Charged multivesicular body protein 7. (461 aa)
	A0A090LTL1	Belongs to the intermediate filament family. (584 aa)
	A0A090MUR5	Intermediate filament protein family and Intermediate filament, ifa/ifb family-containing protein; Belongs to the intermediate filament family. (568 aa)
	A0A090LSH1	Macrophage-capping protein. (470 aa)
	A0A090LS36	ShKT domain-containing protein. (237 aa)
	A0A090LN87	14-3-3 protein zeta; Belongs to the 14-3-3 family. (300 aa)
	A0A090LN70	Endophilin B. (272 aa)
	A0A090LLR9	B-cell receptor-associated protein 29/31 family-containing protein. (213 aa)
	A0A090LLG6	Dynamin-like 120 kDa protein, mitochondrial; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (921 aa)
	A0A090LLE0	14-3-3 protein zeta; Belongs to the 14-3-3 family. (245 aa)
	A0A090LKS8	Polyubiquitin-C. (610 aa)
	A0A090LKP9	Ubiquitin-60S ribosomal protein L40. (128 aa)
	A0A090LKN3	Dynein light chain. (89 aa)
	A0A090LJJ1	Ubiquitin-60S ribosomal protein L40. (116 aa)
	A0A090LJ25	Importin subunit beta. (870 aa)
	A0A090LII4	GH13992p. (218 aa)
	A0A090LHS4	FI20177p1. (549 aa)
	A0A090LDB4	Charged multivesicular body protein 6. (215 aa)
	A0A090LD99	Armadillo-like helical domain and Armadillo-type fold domain-containing protein. (943 aa)
	A0A090LCD0	Uncharacterized protein. (604 aa)
	A0A090LC01	Ubiquitin-40S ribosomal protein S27a. (164 aa)
	A0A090LBT7	High mobility group protein DSP1. (205 aa)
	A0A090LBR9	Bent. (553 aa)
	A0A090LBK3	Lamin Tail Domain domain and Intermediate filament protein family-containing protein; Belongs to the intermediate filament family. (557 aa)
	A0A090LB46	annotation not available (679 aa)
	A0A090L953	O-glycosyltransferase. (1110 aa)
	A0A090L6H3	Polychaetoid; Belongs to the MAGUK family. (1064 aa)
	A0A090L4D2	Histone H1.0. (271 aa)

Your Current Organism:

Strongyloides ratti

NCBI taxonomy Id: 34506
Other names: S. ratti

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A090KXU4	A0A090LBT7	Histone H1.0.	High mobility group protein DSP1.	0.683
A0A090KXU4	A0A090LJ25	Histone H1.0.	Importin subunit beta.	0.786
A0A090L1Q1	A0A090LC01	Zinc finger, RING-type domain and Bcr-Abl oncoprotein oligomerisation domain-containing protein.	Ubiquitin-40S ribosomal protein S27a.	0.906
A0A090L1Q1	A0A090LJJ1	Zinc finger, RING-type domain and Bcr-Abl oncoprotein oligomerisation domain-containing protein.	Ubiquitin-60S ribosomal protein L40.	0.772
A0A090L1Q1	A0A090LKP9	Zinc finger, RING-type domain and Bcr-Abl oncoprotein oligomerisation domain-containing protein.	Ubiquitin-60S ribosomal protein L40.	0.772
A0A090L1Q1	A0A090LKS8	Zinc finger, RING-type domain and Bcr-Abl oncoprotein oligomerisation domain-containing protein.	Polyubiquitin-C.	0.889
A0A090L1Q1	A0A090LS36	Zinc finger, RING-type domain and Bcr-Abl oncoprotein oligomerisation domain-containing protein.	ShKT domain-containing protein.	0.772
A0A090L274	A0A090LSH1	Spectrin alpha chain, erythrocytic 1.	Macrophage-capping protein.	0.478
A0A090L4D2	A0A090LBT7	Histone H1.0.	High mobility group protein DSP1.	0.683
A0A090L4D2	A0A090LJ25	Histone H1.0.	Importin subunit beta.	0.786
A0A090LBK3	A0A090MV87	Lamin Tail Domain domain and Intermediate filament protein family-containing protein; Belongs to the intermediate filament family.	Methylthioribulose-1-phosphate dehydratase.	0.461
A0A090LBR9	A0A090LC01	Bent.	Ubiquitin-40S ribosomal protein S27a.	0.530
A0A090LBR9	A0A090LLE0	Bent.	14-3-3 protein zeta; Belongs to the 14-3-3 family.	0.513
A0A090LBR9	A0A090LN87	Bent.	14-3-3 protein zeta; Belongs to the 14-3-3 family.	0.513
A0A090LBR9	A0A090MX84	Bent.	Bent.	0.899
A0A090LBT7	A0A090KXU4	High mobility group protein DSP1.	Histone H1.0.	0.683
A0A090LBT7	A0A090L4D2	High mobility group protein DSP1.	Histone H1.0.	0.683
A0A090LBT7	A0A090LC01	High mobility group protein DSP1.	Ubiquitin-40S ribosomal protein S27a.	0.642
A0A090LBT7	A0A090LJJ1	High mobility group protein DSP1.	Ubiquitin-60S ribosomal protein L40.	0.517
A0A090LBT7	A0A090LKP9	High mobility group protein DSP1.	Ubiquitin-60S ribosomal protein L40.	0.517