11 items (Strongyloides ratti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A090LKS8	Polyubiquitin-C. (610 aa)
	A0A090LKP9	Ubiquitin-60S ribosomal protein L40. (128 aa)
	A0A090L459	Machado-Joseph disease protein MJD family-containing protein. (234 aa)
	A0A090L7G6	annotation not available (465 aa)
	A0A090LC01	Ubiquitin-40S ribosomal protein S27a. (164 aa)
	A0A090LF27	Zinc finger, C6HC-type domain and E3 ubiquitin-protein ligase parkin family-containing protein. (381 aa)
	A0A090LJJ1	Ubiquitin-60S ribosomal protein L40. (116 aa)
	A0A090LGZ5	Transitional endoplasmic reticulum ATPase. (745 aa)
	A0A090L355	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family. (808 aa)
	A0A090MYD4	Putative L-aspartate dehydrogenase. (267 aa)
	A0A090LS36	ShKT domain-containing protein. (237 aa)

Your Current Organism:

Strongyloides ratti

NCBI taxonomy Id: 34506
Other names: S. ratti

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A090L355	A0A090L459	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.	Machado-Joseph disease protein MJD family-containing protein.	0.927
A0A090L355	A0A090L7G6	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.	annotation not available	0.865
A0A090L355	A0A090LC01	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.	Ubiquitin-40S ribosomal protein S27a.	0.874
A0A090L355	A0A090LF27	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.	Zinc finger, C6HC-type domain and E3 ubiquitin-protein ligase parkin family-containing protein.	0.620
A0A090L355	A0A090LGZ5	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.	Transitional endoplasmic reticulum ATPase.	0.828
A0A090L355	A0A090LJJ1	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.	Ubiquitin-60S ribosomal protein L40.	0.802
A0A090L355	A0A090LKP9	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.	Ubiquitin-60S ribosomal protein L40.	0.802
A0A090L355	A0A090LKS8	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.	Polyubiquitin-C.	0.934
A0A090L355	A0A090LS36	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.	ShKT domain-containing protein.	0.802
A0A090L459	A0A090L355	Machado-Joseph disease protein MJD family-containing protein.	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.	0.927
A0A090L459	A0A090L7G6	Machado-Joseph disease protein MJD family-containing protein.	annotation not available	0.961
A0A090L459	A0A090LC01	Machado-Joseph disease protein MJD family-containing protein.	Ubiquitin-40S ribosomal protein S27a.	0.910
A0A090L459	A0A090LF27	Machado-Joseph disease protein MJD family-containing protein.	Zinc finger, C6HC-type domain and E3 ubiquitin-protein ligase parkin family-containing protein.	0.963
A0A090L459	A0A090LGZ5	Machado-Joseph disease protein MJD family-containing protein.	Transitional endoplasmic reticulum ATPase.	0.927
A0A090L459	A0A090LJJ1	Machado-Joseph disease protein MJD family-containing protein.	Ubiquitin-60S ribosomal protein L40.	0.781
A0A090L459	A0A090LKP9	Machado-Joseph disease protein MJD family-containing protein.	Ubiquitin-60S ribosomal protein L40.	0.781
A0A090L459	A0A090LKS8	Machado-Joseph disease protein MJD family-containing protein.	Polyubiquitin-C.	0.904
A0A090L459	A0A090LS36	Machado-Joseph disease protein MJD family-containing protein.	ShKT domain-containing protein.	0.781
A0A090L7G6	A0A090L355	annotation not available	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.	0.865
A0A090L7G6	A0A090L459	annotation not available	Machado-Joseph disease protein MJD family-containing protein.	0.961