STRINGSTRING
A0A090MVH2 A0A090MVH2 A0A090KX72 A0A090KX72 A0A090KYC8 A0A090KYC8 A0A090KZ32 A0A090KZ32 A0A090L046 A0A090L046 A0A090L0L6 A0A090L0L6 A0A090L0R7 A0A090L0R7 A0A090L140 A0A090L140 A0A090L1M6 A0A090L1M6 A0A090L2I8 A0A090L2I8 A0A090L3S7 A0A090L3S7 A0A090L5C6 A0A090L5C6 A0A090L7N4 A0A090L7N4 A0A090L861 A0A090L861 A0A090L879 A0A090L879 A0A090L882 A0A090L882 A0A090L8R7 A0A090L8R7 A0A090L918 A0A090L918 A0A090L9N0 A0A090L9N0 A0A090L9N9 A0A090L9N9 A0A090LAM0 A0A090LAM0 A0A090LBI8 A0A090LBI8 A0A090LBX8 A0A090LBX8 A0A090LC58 A0A090LC58 A0A090LCI1 A0A090LCI1 A0A090LCK7 A0A090LCK7 A0A090LD19 A0A090LD19 A0A090LDA6 A0A090LDA6 A0A090LF12 A0A090LF12 A0A090LFL8 A0A090LFL8 A0A090LG40 A0A090LG40 A0A090LGG2 A0A090LGG2 A0A090LGN8 A0A090LGN8 A0A090LH87 A0A090LH87 A0A090LI30 A0A090LI30 A0A090LJ15 A0A090LJ15 A0A090LJM1 A0A090LJM1 A0A090LJS4 A0A090LJS4 A0A090MUU0 A0A090MUU0 A0A090N0E0 A0A090N0E0 A0A090MZN0 A0A090MZN0 A0A090MYV2 A0A090MYV2 A0A090MYQ8 A0A090MYQ8 A0A090MY65 A0A090MY65 A0A090MY02 A0A090MY02 A0A090MXT0 A0A090MXT0 A0A090MX03 A0A090MX03 A0A090MV41 A0A090MV41
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A090MVH2Uncharacterized protein. (339 aa)
A0A090KX72Symplekin. (998 aa)
A0A090KYC8Nuclear pore complex protein Nup214. (1340 aa)
A0A090KZ32Histone RNA hairpin-binding protein. (344 aa)
A0A090L046Putative cleavage and polyadenylation specificity factor subunit 4-like protein. (309 aa)
A0A090L0L6ATP-dependent RNA helicase WM6. (425 aa)
A0A090L0R7Belongs to the eukaryotic initiation factor 4E family. (222 aa)
A0A090L140Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. In the CBC complex, ncbp-2 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires ncbp-1 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure. (164 aa)
A0A090L1M6Nuclear RNA export factor 2. (543 aa)
A0A090L2I8annotation not available (1568 aa)
A0A090L3S7Serine/arginine repetitive matrix protein 1. (388 aa)
A0A090L5C6U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (521 aa)
A0A090L7N4CIP29 protein. (262 aa)
A0A090L861Serine/arginine-rich splicing factor 3. (166 aa)
A0A090L879LD29830p. (351 aa)
A0A090L882Histone RNA hairpin-binding protein. (355 aa)
A0A090L8R7Nucleoporin FG repeat-containing protein. (478 aa)
A0A090L918Nucleoporin p54. (458 aa)
A0A090L9N0annotation not available (906 aa)
A0A090L9N9RNA-binding protein with serine-rich domain 1. (248 aa)
A0A090LAM0RNA recognition motif domain and Nucleotide-binding, alpha-beta plait domain-containing protein. (206 aa)
A0A090LBI8Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (759 aa)
A0A090LBX8mRNA export factor. (365 aa)
A0A090LC58Nuclear RNA export factor 2. (611 aa)
A0A090LCI1Pre-mRNA 3'-end-processing factor FIP1. (501 aa)
A0A090LCK7Cleavage and polyadenylation specificity factor subunit 1. (1384 aa)
A0A090LD19Serine/arginine-rich splicing factor 1. (295 aa)
A0A090LDA6Pre-mRNA-processing factor 17. (565 aa)
A0A090LF12annotation not available (436 aa)
A0A090LFL8Pleckstrin homology-like domain-containing protein. (404 aa)
A0A090LG40Nuclear pore complex protein Nup155. (1337 aa)
A0A090LGG2THO complex subunit 2. (1737 aa)
A0A090LGN8Nucleoporin Nup120/160 family-containing protein. (1241 aa)
A0A090LH87THO complex subunit 4. (251 aa)
A0A090LI30Nuclear pore complex protein Nup153. (918 aa)
A0A090LJ15Nuclear RNA export factor 2. (624 aa)
A0A090LJM1Protein mago nashi. (149 aa)
A0A090LJS4Nuclear pore protein. (699 aa)
A0A090MUU0Cleavage and polyadenylation specificity factor subunit 2. (929 aa)
A0A090N0E0Nucleoporin SEH1; Belongs to the WD repeat SEC13 family. (385 aa)
A0A090MZN0Protein SEC13 homolog; Belongs to the WD repeat SEC13 family. (315 aa)
A0A090MYV2Nuclear pore complex protein Nup205. (1362 aa)
A0A090MYQ8Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16. (1070 aa)
A0A090MY65Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (587 aa)
A0A090MY02Splicing factor U2AF 35 kDa subunit. (234 aa)
A0A090MXT0Nuclear transport factor 2, eukaryote domain-containing protein. (132 aa)
A0A090MX03RNA recognition motif domain and Nucleotide-binding, alpha-beta plait domain-containing protein. (207 aa)
A0A090MV41Cleavage and polyadenylation specificity factor 73. (632 aa)
Your Current Organism:
Strongyloides ratti
NCBI taxonomy Id: 34506
Other names: S. ratti
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