50 items (Strongyloides ratti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A090LC01	Ubiquitin-40S ribosomal protein S27a. (164 aa)
	A0A090LCW0	RNA polymerase-associated protein LEO1. (413 aa)
	A0A090LD40	Histone H2B; Belongs to the histone H2B family. (123 aa)
	A0A090LDZ8	Ubiquitin-conjugating enzyme E2-17 kDa; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
	A0A090LF05	Belongs to the ubiquitin-conjugating enzyme family. (146 aa)
	A0A090LFQ0	E3 ubiquitin protein ligase. (855 aa)
	A0A090LHV7	annotation not available (593 aa)
	A0A090LI14	E3 ubiquitin-protein ligase RNF181. (161 aa)
	A0A090LI61	MIP16420p. (141 aa)
	A0A090LIJ6	Ubiquitin-conjugating enzyme E2 G1; Belongs to the ubiquitin-conjugating enzyme family. (154 aa)
	A0A090LJJ1	Ubiquitin-60S ribosomal protein L40. (116 aa)
	A0A090LJS3	Ubiquitin-conjugating enzyme E2 D2; Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
	A0A090LKS8	Polyubiquitin-C. (610 aa)
	A0A090LS36	ShKT domain-containing protein. (237 aa)
	A0A090LVB3	Peroxisomal membrane protein PEX13. (345 aa)
	A0A090LKP9	Ubiquitin-60S ribosomal protein L40. (128 aa)
	A0A090MUL8	Peroxisome assembly protein 12. (175 aa)
	A0A090MUJ4	Histone H2B; Belongs to the histone H2B family. (123 aa)
	A0A090MUN2	Ground-like domain-containing protein. (1053 aa)
	A0A090MV81	Histone H2B; Belongs to the histone H2B family. (123 aa)
	A0A090MW43	RNA polymerase-associated protein RTF1 homolog. (550 aa)
	A0A090MW52	Uncharacterized protein. (278 aa)
	A0A090MWI0	AKT-interacting protein. (279 aa)
	A0A090MX77	PRP40 pre-mRNA processing factor 40 homolog A. (731 aa)
	A0A090MXT1	Ubiquitin-conjugating enzyme E2 G2; Belongs to the ubiquitin-conjugating enzyme family. (180 aa)
	A0A090MXU6	Ubiquitin-conjugating enzyme E2 G1; Belongs to the ubiquitin-conjugating enzyme family. (166 aa)
	A0A090N0K1	Transmembrane protein 129. (359 aa)
	A0A090N0K8	Ubiquitin carboxyl-terminal hydrolase; Belongs to the peptidase C19 family. (1396 aa)
	A0A090N0Z0	Ubiquitin-conjugating enzyme E2 H; Belongs to the ubiquitin-conjugating enzyme family. (226 aa)
	A0A090KXD4	RNA polymerase-associated protein Ctr9 homolog. (957 aa)
	A0A090KY22	Protein YIPF. (241 aa)
	A0A090KYZ7	RNA polymerase-associated protein Ctr9 homolog. (1042 aa)
	A0A090KZL5	Parafibromin. (556 aa)
	A0A090L171	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (269 aa)
	A0A090L263	Uncharacterized protein. (380 aa)
	A0A090L2I2	Uncharacterized protein. (343 aa)
	A0A090L2J7	AT19555p. (152 aa)
	A0A090L2Z4	Ubiquitin-conjugating enzyme E2 K; Belongs to the ubiquitin-conjugating enzyme family. (200 aa)
	A0A090L423	RNA polymerase-associated protein Ctr9 homolog. (1031 aa)
	A0A090L5P4	Potassium channel tetramerisation-type BTB domain and BTB/POZ fold domain-containing protein. (108 aa)
	A0A090L6A0	Histone H2B family and Histone core domain and Histone-fold domain-containing protein; Belongs to the histone H2B family. (910 aa)
	A0A090L6L5	Peroxisome membrane anchor protein Pex14p, N-terminal domain-containing protein. (227 aa)
	A0A090L8D0	Ubiquitin-conjugating enzyme E2 G1. (51 aa)
	A0A090L8G7	Ubiquitin-conjugating enzyme E2 G1. (132 aa)
	A0A090L8S5	Ubiquitin-conjugating enzyme E2-17 kDa; Belongs to the ubiquitin-conjugating enzyme family. (220 aa)
	A0A090L9U7	Histone H2B; Belongs to the histone H2B family. (123 aa)
	A0A090LAH5	Belongs to the ubiquitin-conjugating enzyme family. (247 aa)
	A0A090LAH9	Histone H2B; Belongs to the histone H2B family. (123 aa)
	A0A090LB04	Peroxisome biogenesis factor 10. (360 aa)
	A0A090LB30	Peroxisome biogenesis factor 2. (273 aa)

Your Current Organism:

Strongyloides ratti

NCBI taxonomy Id: 34506
Other names: S. ratti

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A090KXD4	A0A090KZL5	RNA polymerase-associated protein Ctr9 homolog.	Parafibromin.	0.940
A0A090KXD4	A0A090L263	RNA polymerase-associated protein Ctr9 homolog.	Uncharacterized protein.	0.654
A0A090KXD4	A0A090L2I2	RNA polymerase-associated protein Ctr9 homolog.	Uncharacterized protein.	0.654
A0A090KXD4	A0A090L2J7	RNA polymerase-associated protein Ctr9 homolog.	AT19555p.	0.583
A0A090KXD4	A0A090L2Z4	RNA polymerase-associated protein Ctr9 homolog.	Ubiquitin-conjugating enzyme E2 K; Belongs to the ubiquitin-conjugating enzyme family.	0.607
A0A090KXD4	A0A090L5P4	RNA polymerase-associated protein Ctr9 homolog.	Potassium channel tetramerisation-type BTB domain and BTB/POZ fold domain-containing protein.	0.593
A0A090KXD4	A0A090L6A0	RNA polymerase-associated protein Ctr9 homolog.	Histone H2B family and Histone core domain and Histone-fold domain-containing protein; Belongs to the histone H2B family.	0.743
A0A090KXD4	A0A090L8D0	RNA polymerase-associated protein Ctr9 homolog.	Ubiquitin-conjugating enzyme E2 G1.	0.617
A0A090KXD4	A0A090L8G7	RNA polymerase-associated protein Ctr9 homolog.	Ubiquitin-conjugating enzyme E2 G1.	0.617
A0A090KXD4	A0A090L8S5	RNA polymerase-associated protein Ctr9 homolog.	Ubiquitin-conjugating enzyme E2-17 kDa; Belongs to the ubiquitin-conjugating enzyme family.	0.654
A0A090KXD4	A0A090L9U7	RNA polymerase-associated protein Ctr9 homolog.	Histone H2B; Belongs to the histone H2B family.	0.743
A0A090KXD4	A0A090LAH5	RNA polymerase-associated protein Ctr9 homolog.	Belongs to the ubiquitin-conjugating enzyme family.	0.652
A0A090KXD4	A0A090LAH9	RNA polymerase-associated protein Ctr9 homolog.	Histone H2B; Belongs to the histone H2B family.	0.743
A0A090KXD4	A0A090LC01	RNA polymerase-associated protein Ctr9 homolog.	Ubiquitin-40S ribosomal protein S27a.	0.728
A0A090KXD4	A0A090LCW0	RNA polymerase-associated protein Ctr9 homolog.	RNA polymerase-associated protein LEO1.	0.999
A0A090KXD4	A0A090LD40	RNA polymerase-associated protein Ctr9 homolog.	Histone H2B; Belongs to the histone H2B family.	0.743
A0A090KXD4	A0A090LDZ8	RNA polymerase-associated protein Ctr9 homolog.	Ubiquitin-conjugating enzyme E2-17 kDa; Belongs to the ubiquitin-conjugating enzyme family.	0.654
A0A090KXD4	A0A090LF05	RNA polymerase-associated protein Ctr9 homolog.	Belongs to the ubiquitin-conjugating enzyme family.	0.584
A0A090KXD4	A0A090LFQ0	RNA polymerase-associated protein Ctr9 homolog.	E3 ubiquitin protein ligase.	0.767
A0A090KXD4	A0A090LHV7	RNA polymerase-associated protein Ctr9 homolog.	annotation not available	0.593