13 items (Strongyloides ratti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A090LC01	Ubiquitin-40S ribosomal protein S27a. (164 aa)
	A0A090LS36	ShKT domain-containing protein. (237 aa)
	A0A090LRV2	Alpha/beta hydrolase fold-3 domain-containing protein. (392 aa)
	A0A090LML1	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (939 aa)
	A0A090LKS8	Polyubiquitin-C. (610 aa)
	A0A090LKP9	Ubiquitin-60S ribosomal protein L40. (128 aa)
	A0A090L0M3	Alpha/beta hydrolase fold-3 domain-containing protein. (385 aa)
	A0A090N0X5	AP-50; Belongs to the adaptor complexes medium subunit family. (416 aa)
	A0A090LAV1	Dodeca-satellite-binding protein 1. (1191 aa)
	A0A090MWT9	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (142 aa)
	A0A090LSJ9	MD-2-related lipid-recognition domain and Immunoglobulin E-set domain-containing protein. (154 aa)
	A0A090LJJ1	Ubiquitin-60S ribosomal protein L40. (116 aa)
	A0A090LJ41	Cubilin. (4137 aa)

Your Current Organism:

Strongyloides ratti

NCBI taxonomy Id: 34506
Other names: S. ratti

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A090LC01	A0A090LJJ1	Ubiquitin-40S ribosomal protein S27a.	Ubiquitin-60S ribosomal protein L40.	0.984
A0A090LC01	A0A090LKP9	Ubiquitin-40S ribosomal protein S27a.	Ubiquitin-60S ribosomal protein L40.	0.984
A0A090LC01	A0A090LKS8	Ubiquitin-40S ribosomal protein S27a.	Polyubiquitin-C.	0.998
A0A090LC01	A0A090LML1	Ubiquitin-40S ribosomal protein S27a.	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.689
A0A090LC01	A0A090LS36	Ubiquitin-40S ribosomal protein S27a.	ShKT domain-containing protein.	0.983
A0A090LC01	A0A090MWT9	Ubiquitin-40S ribosomal protein S27a.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.655
A0A090LC01	A0A090N0X5	Ubiquitin-40S ribosomal protein S27a.	AP-50; Belongs to the adaptor complexes medium subunit family.	0.714
A0A090LJJ1	A0A090LC01	Ubiquitin-60S ribosomal protein L40.	Ubiquitin-40S ribosomal protein S27a.	0.984
A0A090LJJ1	A0A090LKS8	Ubiquitin-60S ribosomal protein L40.	Polyubiquitin-C.	0.949
A0A090LJJ1	A0A090MWT9	Ubiquitin-60S ribosomal protein L40.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.580
A0A090LJJ1	A0A090N0X5	Ubiquitin-60S ribosomal protein L40.	AP-50; Belongs to the adaptor complexes medium subunit family.	0.594
A0A090LKP9	A0A090LC01	Ubiquitin-60S ribosomal protein L40.	Ubiquitin-40S ribosomal protein S27a.	0.984
A0A090LKP9	A0A090LKS8	Ubiquitin-60S ribosomal protein L40.	Polyubiquitin-C.	0.949
A0A090LKP9	A0A090MWT9	Ubiquitin-60S ribosomal protein L40.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.580
A0A090LKP9	A0A090N0X5	Ubiquitin-60S ribosomal protein L40.	AP-50; Belongs to the adaptor complexes medium subunit family.	0.594
A0A090LKS8	A0A090LC01	Polyubiquitin-C.	Ubiquitin-40S ribosomal protein S27a.	0.998
A0A090LKS8	A0A090LJJ1	Polyubiquitin-C.	Ubiquitin-60S ribosomal protein L40.	0.949
A0A090LKS8	A0A090LKP9	Polyubiquitin-C.	Ubiquitin-60S ribosomal protein L40.	0.949
A0A090LKS8	A0A090LML1	Polyubiquitin-C.	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.707
A0A090LKS8	A0A090LS36	Polyubiquitin-C.	ShKT domain-containing protein.	0.949