89 items (Strongyloides ratti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A090LEF5	Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy. (660 aa)
	A0A090KZQ8	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (448 aa)
	A0A090KYN8	LD27042p. (398 aa)
	A0A090LG82	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (447 aa)
	A0A090LGD1	annotation not available (400 aa)
	A0A090LGP8	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (445 aa)
	A0A090LHX7	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (447 aa)
	A0A090LI94	Autophagy protein 5; Involved in autophagic vesicle formation. (261 aa)
	A0A090LIF1	Serine/threonine-protein phosphatase PGAM5, mitochondrial. (280 aa)
	A0A090LII4	GH13992p. (218 aa)
	A0A090LIJ4	Peptidase C19, ubiquitin carboxyl-terminal hydrolase domain-containing protein; Belongs to the peptidase C19 family. (206 aa)
	A0A090LJF2	Non-specific serine/threonine protein kinase. (598 aa)
	A0A090LJJ1	Ubiquitin-60S ribosomal protein L40. (116 aa)
	A0A090LK88	Ubiquitin carboxyl-terminal hydrolase 30; Belongs to the peptidase C19 family. (284 aa)
	A0A090LKC1	Casein kinase 2 alpha 1; Belongs to the protein kinase superfamily. (347 aa)
	A0A090LKN3	Dynein light chain. (89 aa)
	A0A090LKP9	Ubiquitin-60S ribosomal protein L40. (128 aa)
	A0A090LKS8	Polyubiquitin-C. (610 aa)
	A0A090LM73	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (444 aa)
	A0A090LM76	Phosphoinositide 3-kinase regulatory subunit 4. (1346 aa)
	A0A090LM87	N_BRCA1_IG domain-containing protein. (213 aa)
	A0A090LNA7	GTPase RhebL1. (230 aa)
	A0A090LNJ6	TOMM20-like protein 1. (217 aa)
	A0A090LPB0	Autophagy protein Atg8 ubiquitin like family-containing protein. (123 aa)
	A0A090LQB7	Fibronectin, type III domain and Immunoglobulin-like fold domain-containing protein. (1775 aa)
	A0A090LQU1	Zinc finger, C2CH-type domain-containing protein. (243 aa)
	A0A090LRB4	WD repeat domain phosphoinositide-interacting protein 4. (357 aa)
	A0A090LS36	ShKT domain-containing protein. (237 aa)
	A0A090LTH3	Uncharacterized protein. (508 aa)
	A0A090LU33	Autophagy-related protein 3 domain-containing protein. (190 aa)
	A0A090MUM5	Alicorn. (298 aa)
	A0A090MV07	Charged multivesicular body protein 7. (461 aa)
	A0A090MV29	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (452 aa)
	A0A090MVV2	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (221 aa)
	A0A090MWM2	Ribosomal protein L7Ae/L30e/S12e/Gadd45 domain-containing protein. (145 aa)
	A0A090MWM6	UV radiation resistance protein/autophagy-related protein 14 family-containing protein. (346 aa)
	A0A090MWR9	Methyltransferase domain-containing protein. (337 aa)
	A0A090MXK2	Phosphatidylinositol 3-kinase catalytic subunit type 3. (1050 aa)
	A0A090MYD9	Transmembrane GTPase fzo; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (745 aa)
	A0A090MYJ5	Beclin-1. (377 aa)
	A0A090MYS4	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (452 aa)
	A0A090MYS7	No mechanoreceptor potential B. (837 aa)
	A0A090MZ67	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (452 aa)
	A0A090MZG0	IP17340p. (468 aa)
	A0A090MZJ6	Zinc finger, ZZ-type domain and UBA-like domain-containing protein. (766 aa)
	A0A090MZT1	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (449 aa)
	A0A090N0E5	Ragulator complex protein LAMTOR2. (125 aa)
	A0A090N0H5	Dynein light chain. (129 aa)
	A0A090N0S1	GH13992p. (217 aa)
	A0A090N0U1	RB1-inducible coiled-coil protein 1. (995 aa)
	A0A090L5U4	FUN14 family-containing protein. (146 aa)
	A0A090N0X8	Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (429 aa)
	A0A090N0Z3	Beclin-1. (413 aa)
	btub	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (447 aa)
	A0A090L6Z2	Regulatory-associated protein of mTOR. (1519 aa)
	A0A090L7Q7	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (452 aa)
	A0A090L8P6	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (199 aa)
	A0A090L9H5	Charged multivesicular body protein 2a. (217 aa)
	A0A090L9X0	Mitochondrial import receptor subunit TOM70. (567 aa)
	A0A090LA72	Autophagy-related protein 16-2. (545 aa)
	A0A090LAN2	Autophagy-specific gene 1. (964 aa)
	A0A090LAY0	Uncharacterized protein. (415 aa)
	A0A090LBM4	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. (391 aa)
	A0A090LBW0	Uncharacterized protein. (383 aa)
	A0A090LC01	Ubiquitin-40S ribosomal protein S27a. (164 aa)
	A0A090LC15	FI14826p. (282 aa)
	A0A090LCB0	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (443 aa)
	A0A090LCK6	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (132 aa)
	A0A090LCQ2	Uncharacterized protein. (384 aa)
	A0A090LDB4	Charged multivesicular body protein 6. (215 aa)
	A0A090LDU1	Porin domain and Eukaryotic porin/Tom40 family-containing protein. (308 aa)
	A0A090LEG9	Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (396 aa)
	A0A090LEN3	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (448 aa)
	A0A090LEY9	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (447 aa)
	A0A090LF05	Belongs to the ubiquitin-conjugating enzyme family. (146 aa)
	A0A090LF27	Zinc finger, C6HC-type domain and E3 ubiquitin-protein ligase parkin family-containing protein. (381 aa)
	A0A090LFM6	IP17340p. (578 aa)
	A0A090LFQ5	Mitochondrial import receptor subunit TOM7 family-containing protein. (58 aa)
	A0A090L591	Immunoglobulin E-set domain-containing protein. (517 aa)
	A0A090L588	Charged multivesicular body protein 2a. (177 aa)
	A0A090L4X5	Protein DJ-1. (185 aa)
	A0A090L4P2	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (449 aa)
	A0A090L4D4	Target of rapamycin complex subunit LST8. (369 aa)
	A0A090L4B4	BTB/POZ fold domain-containing protein. (291 aa)
	A0A090L351	Mitochondrial import receptor subunit TOM22 homolog. (105 aa)
	A0A090L2T1	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (795 aa)
	A0A090L0Y3	GH16429p. (324 aa)
	A0A090L064	Cytoplasmic dynein 1 intermediate chain 2. (643 aa)
	A0A090L057	GH04846p. (307 aa)

Your Current Organism:

Strongyloides ratti

NCBI taxonomy Id: 34506
Other names: S. ratti

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A090KYN8	A0A090MYD9	A0A090KYN8	A0A090MYD9	LD27042p.	Transmembrane GTPase fzo; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.849
A0A090KZQ8	A0A090L064	A0A090KZQ8	A0A090L064	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Cytoplasmic dynein 1 intermediate chain 2.	0.701
A0A090KZQ8	A0A090LBM4	A0A090KZQ8	A0A090LBM4	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	0.429
A0A090KZQ8	A0A090LC01	A0A090KZQ8	A0A090LC01	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Ubiquitin-40S ribosomal protein S27a.	0.411
A0A090KZQ8	A0A090LEY9	A0A090KZQ8	A0A090LEY9	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.820
A0A090KZQ8	A0A090LGP8	A0A090KZQ8	A0A090LGP8	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.820
A0A090KZQ8	A0A090LII4	A0A090KZQ8	A0A090LII4	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	GH13992p.	0.503
A0A090KZQ8	A0A090LKN3	A0A090KZQ8	A0A090LKN3	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Dynein light chain.	0.459
A0A090KZQ8	A0A090LM73	A0A090KZQ8	A0A090LM73	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.820
A0A090KZQ8	A0A090LNA7	A0A090KZQ8	A0A090LNA7	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	GTPase RhebL1.	0.509
A0A090KZQ8	A0A090MWM2	A0A090KZQ8	A0A090MWM2	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Ribosomal protein L7Ae/L30e/S12e/Gadd45 domain-containing protein.	0.461
A0A090KZQ8	A0A090N0H5	A0A090KZQ8	A0A090N0H5	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Dynein light chain.	0.459
A0A090KZQ8	A0A090N0S1	A0A090KZQ8	A0A090N0S1	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	GH13992p.	0.503
A0A090KZQ8	btub	A0A090KZQ8	Q4KS26	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.820
A0A090L057	A0A090L0Y3	A0A090L057	A0A090L0Y3	GH04846p.	GH16429p.	0.999
A0A090L057	A0A090L4D4	A0A090L057	A0A090L4D4	GH04846p.	Target of rapamycin complex subunit LST8.	0.955
A0A090L057	A0A090L6Z2	A0A090L057	A0A090L6Z2	GH04846p.	Regulatory-associated protein of mTOR.	0.995
A0A090L057	A0A090LAN2	A0A090L057	A0A090LAN2	GH04846p.	Autophagy-specific gene 1.	0.724
A0A090L057	A0A090LF05	A0A090L057	A0A090LF05	GH04846p.	Belongs to the ubiquitin-conjugating enzyme family.	0.608
A0A090L057	A0A090LFM6	A0A090L057	A0A090LFM6	GH04846p.	IP17340p.	0.661