11 items (Strongyloides ratti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A090LBW0	Uncharacterized protein. (383 aa)
	A0A090LM87	N_BRCA1_IG domain-containing protein. (213 aa)
	A0A090LTH3	Uncharacterized protein. (508 aa)
	A0A090LS36	ShKT domain-containing protein. (237 aa)
	A0A090MZJ6	Zinc finger, ZZ-type domain and UBA-like domain-containing protein. (766 aa)
	A0A090LKS8	Polyubiquitin-C. (610 aa)
	A0A090LKP9	Ubiquitin-60S ribosomal protein L40. (128 aa)
	A0A090LK88	Ubiquitin carboxyl-terminal hydrolase 30; Belongs to the peptidase C19 family. (284 aa)
	A0A090LJJ1	Ubiquitin-60S ribosomal protein L40. (116 aa)
	A0A090LIJ4	Peptidase C19, ubiquitin carboxyl-terminal hydrolase domain-containing protein; Belongs to the peptidase C19 family. (206 aa)
	A0A090LC01	Ubiquitin-40S ribosomal protein S27a. (164 aa)

Your Current Organism:

Strongyloides ratti

NCBI taxonomy Id: 34506
Other names: S. ratti

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A090LBW0	A0A090LC01	Uncharacterized protein.	Ubiquitin-40S ribosomal protein S27a.	0.905
A0A090LBW0	A0A090LJJ1	Uncharacterized protein.	Ubiquitin-60S ribosomal protein L40.	0.778
A0A090LBW0	A0A090LKP9	Uncharacterized protein.	Ubiquitin-60S ribosomal protein L40.	0.778
A0A090LBW0	A0A090LKS8	Uncharacterized protein.	Polyubiquitin-C.	0.820
A0A090LBW0	A0A090LM87	Uncharacterized protein.	N_BRCA1_IG domain-containing protein.	0.878
A0A090LBW0	A0A090LS36	Uncharacterized protein.	ShKT domain-containing protein.	0.778
A0A090LC01	A0A090LBW0	Ubiquitin-40S ribosomal protein S27a.	Uncharacterized protein.	0.905
A0A090LC01	A0A090LIJ4	Ubiquitin-40S ribosomal protein S27a.	Peptidase C19, ubiquitin carboxyl-terminal hydrolase domain-containing protein; Belongs to the peptidase C19 family.	0.937
A0A090LC01	A0A090LJJ1	Ubiquitin-40S ribosomal protein S27a.	Ubiquitin-60S ribosomal protein L40.	0.984
A0A090LC01	A0A090LK88	Ubiquitin-40S ribosomal protein S27a.	Ubiquitin carboxyl-terminal hydrolase 30; Belongs to the peptidase C19 family.	0.937
A0A090LC01	A0A090LKP9	Ubiquitin-40S ribosomal protein S27a.	Ubiquitin-60S ribosomal protein L40.	0.984
A0A090LC01	A0A090LKS8	Ubiquitin-40S ribosomal protein S27a.	Polyubiquitin-C.	0.998
A0A090LC01	A0A090LM87	Ubiquitin-40S ribosomal protein S27a.	N_BRCA1_IG domain-containing protein.	0.819
A0A090LC01	A0A090LS36	Ubiquitin-40S ribosomal protein S27a.	ShKT domain-containing protein.	0.983
A0A090LC01	A0A090LTH3	Ubiquitin-40S ribosomal protein S27a.	Uncharacterized protein.	0.644
A0A090LC01	A0A090MZJ6	Ubiquitin-40S ribosomal protein S27a.	Zinc finger, ZZ-type domain and UBA-like domain-containing protein.	0.905
A0A090LIJ4	A0A090LC01	Peptidase C19, ubiquitin carboxyl-terminal hydrolase domain-containing protein; Belongs to the peptidase C19 family.	Ubiquitin-40S ribosomal protein S27a.	0.937
A0A090LIJ4	A0A090LJJ1	Peptidase C19, ubiquitin carboxyl-terminal hydrolase domain-containing protein; Belongs to the peptidase C19 family.	Ubiquitin-60S ribosomal protein L40.	0.829
A0A090LIJ4	A0A090LKP9	Peptidase C19, ubiquitin carboxyl-terminal hydrolase domain-containing protein; Belongs to the peptidase C19 family.	Ubiquitin-60S ribosomal protein L40.	0.829
A0A090LIJ4	A0A090LKS8	Peptidase C19, ubiquitin carboxyl-terminal hydrolase domain-containing protein; Belongs to the peptidase C19 family.	Polyubiquitin-C.	0.905