14 items (Strongyloides ratti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A090L551	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (133 aa)
	A0A090L8N1	NEDD8. (118 aa)
	A0A090L993	Ubiquitin-like domain and Ubiquitin family-containing protein. (93 aa)
	A0A090LBI1	Uncharacterized protein. (472 aa)
	A0A090LBW8	Ubiquitin-like domain-containing protein. (797 aa)
	A0A090LC01	Ubiquitin-40S ribosomal protein S27a. (164 aa)
	A0A090LF27	Zinc finger, C6HC-type domain and E3 ubiquitin-protein ligase parkin family-containing protein. (381 aa)
	A0A090LJJ1	Ubiquitin-60S ribosomal protein L40. (116 aa)
	A0A090LKP9	Ubiquitin-60S ribosomal protein L40. (128 aa)
	A0A090LKS8	Polyubiquitin-C. (610 aa)
	A0A090LMK6	Small ubiquitin-related modifier. (106 aa)
	A0A090MWE8	Novel protein similar to human splicing factor 3a, subunit 1, 120kD. (647 aa)
	A0A090MY80	LD48048p. (427 aa)
	A0A090MZR2	Ubiquitin carboxyl-terminal hydrolase. (477 aa)

Your Current Organism:

Strongyloides ratti

NCBI taxonomy Id: 34506
Other names: S. ratti

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A090L551	A0A090L8N1	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	NEDD8.	0.920
A0A090L551	A0A090L993	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	Ubiquitin-like domain and Ubiquitin family-containing protein.	0.912
A0A090L551	A0A090LBI1	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	Uncharacterized protein.	0.934
A0A090L551	A0A090LC01	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	Ubiquitin-40S ribosomal protein S27a.	0.999
A0A090L551	A0A090LF27	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	Zinc finger, C6HC-type domain and E3 ubiquitin-protein ligase parkin family-containing protein.	0.914
A0A090L551	A0A090LJJ1	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	Ubiquitin-60S ribosomal protein L40.	0.999
A0A090L551	A0A090LKP9	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	Ubiquitin-60S ribosomal protein L40.	0.999
A0A090L551	A0A090LKS8	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	Polyubiquitin-C.	0.912
A0A090L551	A0A090LMK6	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	Small ubiquitin-related modifier.	0.889
A0A090L551	A0A090MZR2	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	Ubiquitin carboxyl-terminal hydrolase.	0.916
A0A090L8N1	A0A090L551	NEDD8.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.920
A0A090L8N1	A0A090L993	NEDD8.	Ubiquitin-like domain and Ubiquitin family-containing protein.	0.869
A0A090L8N1	A0A090LBI1	NEDD8.	Uncharacterized protein.	0.558
A0A090L8N1	A0A090LC01	NEDD8.	Ubiquitin-40S ribosomal protein S27a.	0.960
A0A090L8N1	A0A090LF27	NEDD8.	Zinc finger, C6HC-type domain and E3 ubiquitin-protein ligase parkin family-containing protein.	0.848
A0A090L8N1	A0A090LJJ1	NEDD8.	Ubiquitin-60S ribosomal protein L40.	0.972
A0A090L8N1	A0A090LKP9	NEDD8.	Ubiquitin-60S ribosomal protein L40.	0.898
A0A090L8N1	A0A090LKS8	NEDD8.	Polyubiquitin-C.	0.905
A0A090L8N1	A0A090LMK6	NEDD8.	Small ubiquitin-related modifier.	0.986
A0A090L8N1	A0A090MZR2	NEDD8.	Ubiquitin carboxyl-terminal hydrolase.	0.872