39 items (Strongyloides ratti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A090N039	Mitogen-activated protein kinase. (380 aa)
	A0A090N0H8	annotation not available (390 aa)
	A0A090N0Z3	Beclin-1. (413 aa)
	A0A090LKS8	Polyubiquitin-C. (610 aa)
	A0A090LS36	ShKT domain-containing protein. (237 aa)
	A0A090LST9	MIP04163p. (615 aa)
	A0A090MVV2	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (221 aa)
	A0A090MXJ5	Ubiquitin carboxyl-terminal hydrolase 32; Belongs to the peptidase C19 family. (974 aa)
	A0A090MYD9	Transmembrane GTPase fzo; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (745 aa)
	A0A090MYJ5	Beclin-1. (377 aa)
	A0A090MZ78	Ras-related protein M-Ras. (211 aa)
	A0A090MZJ6	Zinc finger, ZZ-type domain and UBA-like domain-containing protein. (766 aa)
	A0A090LKP9	Ubiquitin-60S ribosomal protein L40. (128 aa)
	A0A090MZK0	Drongo. (465 aa)
	A0A090LKC1	Casein kinase 2 alpha 1; Belongs to the protein kinase superfamily. (347 aa)
	A0A090LK88	Ubiquitin carboxyl-terminal hydrolase 30; Belongs to the peptidase C19 family. (284 aa)
	A0A090LJJ1	Ubiquitin-60S ribosomal protein L40. (116 aa)
	A0A090LIJ4	Peptidase C19, ubiquitin carboxyl-terminal hydrolase domain-containing protein; Belongs to the peptidase C19 family. (206 aa)
	A0A090LIF1	Serine/threonine-protein phosphatase PGAM5, mitochondrial. (280 aa)
	A0A090LI94	Autophagy protein 5; Involved in autophagic vesicle formation. (261 aa)
	A0A090LI39	annotation not available (466 aa)
	A0A090LF61	Ubiquitin carboxyl-terminal hydrolase. (806 aa)
	A0A090LF44	annotation not available (501 aa)
	A0A090LF27	Zinc finger, C6HC-type domain and E3 ubiquitin-protein ligase parkin family-containing protein. (381 aa)
	A0A090LEH0	Methyltransferase-like protein 17, mitochondrial. (514 aa)
	A0A090LE23	Tyrosine-protein kinase. (568 aa)
	A0A090LDE6	Ubiquitin carboxyl-terminal hydrolase 32. (109 aa)
	A0A090LCQ5	Ras-like protein 1. (185 aa)
	A0A090LC01	Ubiquitin-40S ribosomal protein S27a. (164 aa)
	A0A090LBW0	Uncharacterized protein. (383 aa)
	A0A090L8X7	Ras-related protein Rab-7a. (213 aa)
	A0A090L8P6	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (199 aa)
	A0A090L8M0	annotation not available (356 aa)
	A0A090L6X6	Ubiquitin carboxyl-terminal hydrolase 32; Belongs to the peptidase C19 family. (986 aa)
	A0A090L6M9	Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering. (151 aa)
	A0A090L5U4	FUN14 family-containing protein. (146 aa)
	A0A090L429	annotation not available (566 aa)
	A0A090L2T1	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (795 aa)
	A0A090L2R4	PAS domain-containing protein. (674 aa)

Your Current Organism:

Strongyloides ratti

NCBI taxonomy Id: 34506
Other names: S. ratti

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A090L2R4	A0A090L429	PAS domain-containing protein.	annotation not available	0.483
A0A090L2R4	A0A090L6X6	PAS domain-containing protein.	Ubiquitin carboxyl-terminal hydrolase 32; Belongs to the peptidase C19 family.	0.630
A0A090L2R4	A0A090L8M0	PAS domain-containing protein.	annotation not available	0.483
A0A090L2R4	A0A090LBW0	PAS domain-containing protein.	Uncharacterized protein.	0.495
A0A090L2R4	A0A090LC01	PAS domain-containing protein.	Ubiquitin-40S ribosomal protein S27a.	0.756
A0A090L2R4	A0A090LDE6	PAS domain-containing protein.	Ubiquitin carboxyl-terminal hydrolase 32.	0.630
A0A090L2R4	A0A090LE23	PAS domain-containing protein.	Tyrosine-protein kinase.	0.640
A0A090L2R4	A0A090LF27	PAS domain-containing protein.	Zinc finger, C6HC-type domain and E3 ubiquitin-protein ligase parkin family-containing protein.	0.489
A0A090L2R4	A0A090LKS8	PAS domain-containing protein.	Polyubiquitin-C.	0.834
A0A090L2R4	A0A090LST9	PAS domain-containing protein.	MIP04163p.	0.580
A0A090L2R4	A0A090MXJ5	PAS domain-containing protein.	Ubiquitin carboxyl-terminal hydrolase 32; Belongs to the peptidase C19 family.	0.630
A0A090L2R4	A0A090MZJ6	PAS domain-containing protein.	Zinc finger, ZZ-type domain and UBA-like domain-containing protein.	0.495
A0A090L2T1	A0A090LBW0	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.	Uncharacterized protein.	0.489
A0A090L2T1	A0A090LI94	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.	Autophagy protein 5; Involved in autophagic vesicle formation.	0.798
A0A090L2T1	A0A090MYJ5	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.	Beclin-1.	0.843
A0A090L2T1	A0A090MZJ6	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.	Zinc finger, ZZ-type domain and UBA-like domain-containing protein.	0.489
A0A090L2T1	A0A090N0Z3	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.	Beclin-1.	0.843
A0A090L429	A0A090L2R4	annotation not available	PAS domain-containing protein.	0.483
A0A090L429	A0A090LC01	annotation not available	Ubiquitin-40S ribosomal protein S27a.	0.509
A0A090L429	A0A090LE23	annotation not available	Tyrosine-protein kinase.	0.499