(38 nodes) Nitrogen metabolism network (Kutzneria sp. 744)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:
	EWM12652.1	Glutamine synthetase; Truncated CDS; unextendable partial coding region; Belongs to the glutamine synthetase family. (272 aa)
	EWM09743.1	Iron-sulfur cluster-binding protein, Rieske family. (277 aa)
	EWM10171.1	Pyridine nucleotide-disulfide oxidoreductase. (542 aa)
	EWM10492.1	Aliphatic nitrilase. (314 aa)
	EWM11156.1	2-nitropropane dioxygenase. (368 aa)
	EWM11187.1	2-nitropropane dioxygenase. (362 aa)
	cynS	Cyanate lyase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family. (152 aa)
	EWM16672.1	Glutamate synthase subunit (NADPH/NADH) small. (501 aa)
	EWM12883.1	Nitrite reductase [NAD(P)H], large subunit. (481 aa)
	EWM12884.1	Nitrite extrusion protein. (455 aa)
	EWM12971.1	ABC transporter permease component. (246 aa)
	EWM12978.1	Barstar (barnase inhibitor) superfamily. (95 aa)
	EWM12982.1	2-nitropropane dioxygenase. (346 aa)
	EWM13065.1	Glutamine synthetase. (452 aa)
	EWM13099.1	Glutamate dehydrogenase. (1634 aa)
	EWM13155.1	Glutamine synthetase. (448 aa)
	EWM13705.1	Hypothetical protein. (161 aa)
	EWM13782.1	Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (392 aa)
	EWM13814.1	Glutamine synthetase. (474 aa)
	EWM13823.1	Glutamine synthetase. (447 aa)
	EWM13888.1	Nitrite reductase [NAD(P)H], large subunit; Truncated CDS; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (813 aa)
	EWM14489.1	Carbonic anhydrase. (168 aa)
	EWM16322.1	Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (392 aa)
	EWM16671.1	Glutamate synthase subunit (NADPH/NADH) large. (1518 aa)
	EWM19185.1	Nitrate reductase 1, gamma subunit. (247 aa)
	EWM19183.1	Nitrate reductase 1, beta subunit. (532 aa)
	EWM19182.1	Nitrate reductase 1, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1236 aa)
	EWM18971.1	Sulfate transporter. (578 aa)
	EWM18695.1	Carbonate dehydratase. (180 aa)
	EWM18366.1	Sulfonate/nitrate/taurine transporter permease. (288 aa)
	EWM18031.1	Glutamate synthase subunit (NADPH/NADH) large. (1692 aa)
	EWM18030.1	Glutamate synthase subunit (NADPH/NADH) small. (479 aa)
	EWM17647.1	Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (381 aa)
	EWM17498.1	Nitrilase. (320 aa)
	EWM17294.1	Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (371 aa)
	EWM16868.1	Membrane dipeptidase. (394 aa)
	EWM16739.1	Nitrilase. (311 aa)
	EWM16692.1	Inorganic anion transporter, sulfate permease (SulP) family; Truncated CDS. (774 aa)

Your Current Organism:

Kutzneria sp. 744

NCBI taxonomy Id: 345341
Other names: K. sp. 744

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EWM09743.1	EWM10171.1	KUTG_00047	KUTG_00475	Iron-sulfur cluster-binding protein, Rieske family.	Pyridine nucleotide-disulfide oxidoreductase.	0.428
EWM09743.1	EWM12884.1	KUTG_00047	KUTG_03188	Iron-sulfur cluster-binding protein, Rieske family.	Nitrite extrusion protein.	0.510
EWM09743.1	EWM13099.1	KUTG_00047	KUTG_03403	Iron-sulfur cluster-binding protein, Rieske family.	Glutamate dehydrogenase.	0.502
EWM10171.1	EWM09743.1	KUTG_00475	KUTG_00047	Pyridine nucleotide-disulfide oxidoreductase.	Iron-sulfur cluster-binding protein, Rieske family.	0.428
EWM10171.1	EWM10492.1	KUTG_00475	KUTG_00796	Pyridine nucleotide-disulfide oxidoreductase.	Aliphatic nitrilase.	0.722
EWM10171.1	EWM12652.1	KUTG_00475	KUTG_02956	Pyridine nucleotide-disulfide oxidoreductase.	Glutamine synthetase; Truncated CDS; unextendable partial coding region; Belongs to the glutamine synthetase family.	0.755
EWM10171.1	EWM12883.1	KUTG_00475	KUTG_03187	Pyridine nucleotide-disulfide oxidoreductase.	Nitrite reductase [NAD(P)H], large subunit.	0.627
EWM10171.1	EWM13065.1	KUTG_00475	KUTG_03369	Pyridine nucleotide-disulfide oxidoreductase.	Glutamine synthetase.	0.755
EWM10171.1	EWM13099.1	KUTG_00475	KUTG_03403	Pyridine nucleotide-disulfide oxidoreductase.	Glutamate dehydrogenase.	0.791
EWM10171.1	EWM13155.1	KUTG_00475	KUTG_03459	Pyridine nucleotide-disulfide oxidoreductase.	Glutamine synthetase.	0.755
EWM10171.1	EWM13782.1	KUTG_00475	KUTG_04086	Pyridine nucleotide-disulfide oxidoreductase.	Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	0.865
EWM10171.1	EWM13814.1	KUTG_00475	KUTG_04118	Pyridine nucleotide-disulfide oxidoreductase.	Glutamine synthetase.	0.806
EWM10171.1	EWM13823.1	KUTG_00475	KUTG_04127	Pyridine nucleotide-disulfide oxidoreductase.	Glutamine synthetase.	0.755
EWM10171.1	EWM13888.1	KUTG_00475	KUTG_04192	Pyridine nucleotide-disulfide oxidoreductase.	Nitrite reductase [NAD(P)H], large subunit; Truncated CDS; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.	0.627
EWM10171.1	EWM16322.1	KUTG_00475	KUTG_06626	Pyridine nucleotide-disulfide oxidoreductase.	Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	0.865
EWM10171.1	EWM16671.1	KUTG_00475	KUTG_06975	Pyridine nucleotide-disulfide oxidoreductase.	Glutamate synthase subunit (NADPH/NADH) large.	0.999
EWM10171.1	EWM16672.1	KUTG_00475	KUTG_06976	Pyridine nucleotide-disulfide oxidoreductase.	Glutamate synthase subunit (NADPH/NADH) small.	0.560
EWM10171.1	EWM16739.1	KUTG_00475	KUTG_07043	Pyridine nucleotide-disulfide oxidoreductase.	Nitrilase.	0.722
EWM10171.1	EWM17294.1	KUTG_00475	KUTG_07598	Pyridine nucleotide-disulfide oxidoreductase.	Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	0.865
EWM10171.1	EWM17498.1	KUTG_00475	KUTG_07802	Pyridine nucleotide-disulfide oxidoreductase.	Nitrilase.	0.722