(12 nodes) Mixed, incl. Beta-catenin binding, and GBF-interacting protein 1 network (Papaver somniferum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C5167_038963	Uncharacterized protein. (884 aa)
	C5167_018883	Uncharacterized protein. (125 aa)
	C5167_018962	Uncharacterized protein. (801 aa)
	C5167_012020	Uncharacterized protein. (87 aa)
	C5167_033459	CYTH domain-containing protein. (431 aa)
	C5167_033645	PRK domain-containing protein. (88 aa)
	C5167_035325	Protein kinase domain-containing protein. (167 aa)
	C5167_048405	Protein kinase domain-containing protein. (625 aa)
	C5167_049556	Protein kinase domain-containing protein. (127 aa)
	C5167_002602	Uncharacterized protein. (283 aa)
	C5167_002791	Uncharacterized protein. (322 aa)
	C5167_046866	Uncharacterized protein. (322 aa)

Your Current Organism:

Papaver somniferum

NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C5167_002602	C5167_012020	A0A4Y7L053	A0A4Y7J0I4	Uncharacterized protein.	Uncharacterized protein.	0.512
C5167_002602	C5167_018883	A0A4Y7L053	A0A4Y7IRW0	Uncharacterized protein.	Uncharacterized protein.	0.512
C5167_002602	C5167_018962	A0A4Y7L053	A0A4Y7ISR9	Uncharacterized protein.	Uncharacterized protein.	0.518
C5167_002602	C5167_033459	A0A4Y7L053	A0A4Y7KE87	Uncharacterized protein.	CYTH domain-containing protein.	0.518
C5167_002602	C5167_033645	A0A4Y7L053	A0A4Y7KF17	Uncharacterized protein.	PRK domain-containing protein.	0.518
C5167_002602	C5167_035325	A0A4Y7L053	A0A4Y7KFG2	Uncharacterized protein.	Protein kinase domain-containing protein.	0.512
C5167_002602	C5167_038963	A0A4Y7L053	A0A4Y7IE99	Uncharacterized protein.	Uncharacterized protein.	0.518
C5167_002602	C5167_048405	A0A4Y7L053	A0A4Y7KLU6	Uncharacterized protein.	Protein kinase domain-containing protein.	0.512
C5167_002602	C5167_049556	A0A4Y7L053	A0A4Y7KP12	Uncharacterized protein.	Protein kinase domain-containing protein.	0.512
C5167_002791	C5167_012020	A0A4Y7L2F0	A0A4Y7J0I4	Uncharacterized protein.	Uncharacterized protein.	0.512
C5167_002791	C5167_018883	A0A4Y7L2F0	A0A4Y7IRW0	Uncharacterized protein.	Uncharacterized protein.	0.512
C5167_002791	C5167_018962	A0A4Y7L2F0	A0A4Y7ISR9	Uncharacterized protein.	Uncharacterized protein.	0.518
C5167_002791	C5167_033459	A0A4Y7L2F0	A0A4Y7KE87	Uncharacterized protein.	CYTH domain-containing protein.	0.518
C5167_002791	C5167_033645	A0A4Y7L2F0	A0A4Y7KF17	Uncharacterized protein.	PRK domain-containing protein.	0.518
C5167_002791	C5167_035325	A0A4Y7L2F0	A0A4Y7KFG2	Uncharacterized protein.	Protein kinase domain-containing protein.	0.512
C5167_002791	C5167_038963	A0A4Y7L2F0	A0A4Y7IE99	Uncharacterized protein.	Uncharacterized protein.	0.518
C5167_002791	C5167_048405	A0A4Y7L2F0	A0A4Y7KLU6	Uncharacterized protein.	Protein kinase domain-containing protein.	0.512
C5167_002791	C5167_049556	A0A4Y7L2F0	A0A4Y7KP12	Uncharacterized protein.	Protein kinase domain-containing protein.	0.512
C5167_012020	C5167_002602	A0A4Y7J0I4	A0A4Y7L053	Uncharacterized protein.	Uncharacterized protein.	0.512
C5167_012020	C5167_002791	A0A4Y7J0I4	A0A4Y7L2F0	Uncharacterized protein.	Uncharacterized protein.	0.512