(13 nodes) Mixed, incl. VPS9 domain, and Rab protein signal transduction network (Papaver somniferum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C5167_013153	VPS9 domain-containing protein. (445 aa)
	C5167_014661	Uncharacterized protein. (176 aa)
	C5167_006913	Myb-like domain-containing protein. (361 aa)
	C5167_022570	MBOAT_2 domain-containing protein. (365 aa)
	C5167_022813	Rab-GAP TBC domain-containing protein. (422 aa)
	C5167_024307	VPS9 domain-containing protein. (478 aa)
	C5167_024932	Uncharacterized protein. (221 aa)
	C5167_033940	Myb-like domain-containing protein. (535 aa)
	C5167_034899	Uncharacterized protein. (200 aa)
	C5167_048098	MBOAT_2 domain-containing protein. (335 aa)
	C5167_049290	Uncharacterized protein. (102 aa)
	C5167_050433	Uncharacterized protein. (201 aa)
	C5167_002844	Uncharacterized protein. (558 aa)

Your Current Organism:

Papaver somniferum

NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C5167_002844	C5167_006913	A0A4Y7L0T6	A0A4Y7JIM2	Uncharacterized protein.	Myb-like domain-containing protein.	0.463
C5167_002844	C5167_014661	A0A4Y7L0T6	A0A4Y7J3V1	Uncharacterized protein.	Uncharacterized protein.	0.534
C5167_002844	C5167_022813	A0A4Y7L0T6	A0A4Y7JM04	Uncharacterized protein.	Rab-GAP TBC domain-containing protein.	0.400
C5167_002844	C5167_024932	A0A4Y7L0T6	A0A4Y7JRK2	Uncharacterized protein.	Uncharacterized protein.	0.534
C5167_002844	C5167_033940	A0A4Y7L0T6	A0A4Y7KFI8	Uncharacterized protein.	Myb-like domain-containing protein.	0.463
C5167_002844	C5167_034899	A0A4Y7L0T6	A0A4Y7KI41	Uncharacterized protein.	Uncharacterized protein.	0.463
C5167_002844	C5167_050433	A0A4Y7L0T6	A0A4Y7KSV7	Uncharacterized protein.	Uncharacterized protein.	0.463
C5167_006913	C5167_002844	A0A4Y7JIM2	A0A4Y7L0T6	Myb-like domain-containing protein.	Uncharacterized protein.	0.463
C5167_006913	C5167_013153	A0A4Y7JIM2	A0A4Y7J1H0	Myb-like domain-containing protein.	VPS9 domain-containing protein.	0.463
C5167_006913	C5167_022570	A0A4Y7JIM2	A0A4Y7JLA8	Myb-like domain-containing protein.	MBOAT_2 domain-containing protein.	0.463
C5167_006913	C5167_022813	A0A4Y7JIM2	A0A4Y7JM04	Myb-like domain-containing protein.	Rab-GAP TBC domain-containing protein.	0.672
C5167_006913	C5167_024307	A0A4Y7JIM2	A0A4Y7JN63	Myb-like domain-containing protein.	VPS9 domain-containing protein.	0.463
C5167_006913	C5167_048098	A0A4Y7JIM2	A0A4Y7KKJ9	Myb-like domain-containing protein.	MBOAT_2 domain-containing protein.	0.463
C5167_006913	C5167_049290	A0A4Y7JIM2	A0A4Y7KLT4	Myb-like domain-containing protein.	Uncharacterized protein.	0.463
C5167_013153	C5167_006913	A0A4Y7J1H0	A0A4Y7JIM2	VPS9 domain-containing protein.	Myb-like domain-containing protein.	0.463
C5167_013153	C5167_014661	A0A4Y7J1H0	A0A4Y7J3V1	VPS9 domain-containing protein.	Uncharacterized protein.	0.534
C5167_013153	C5167_022813	A0A4Y7J1H0	A0A4Y7JM04	VPS9 domain-containing protein.	Rab-GAP TBC domain-containing protein.	0.400
C5167_013153	C5167_024932	A0A4Y7J1H0	A0A4Y7JRK2	VPS9 domain-containing protein.	Uncharacterized protein.	0.534
C5167_013153	C5167_033940	A0A4Y7J1H0	A0A4Y7KFI8	VPS9 domain-containing protein.	Myb-like domain-containing protein.	0.463
C5167_013153	C5167_034899	A0A4Y7J1H0	A0A4Y7KI41	VPS9 domain-containing protein.	Uncharacterized protein.	0.733