(21 nodes) Mixed, incl. Dual specificity phosphatase, catalytic domain, and Mitochondrial fission ELM1 network (Papaver somniferum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C5167_041004	Uncharacterized protein. (333 aa)
	C5167_018512	Uncharacterized protein. (286 aa)
	C5167_019918	Uncharacterized protein. (287 aa)
	C5167_020717	PITH domain-containing protein. (177 aa)
	C5167_020800	Uncharacterized protein. (138 aa)
	C5167_015025	Uncharacterized protein. (1260 aa)
	C5167_015525	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (275 aa)
	C5167_005976	Uncharacterized protein. (213 aa)
	C5167_022534	Uncharacterized protein. (95 aa)
	C5167_024028	DUF3883 domain-containing protein. (2802 aa)
	C5167_025218	Uncharacterized protein. (205 aa)
	C5167_032233	Uncharacterized protein. (352 aa)
	C5167_031996	Uncharacterized protein. (406 aa)
	C5167_035331	Uncharacterized protein. (469 aa)
	C5167_034345	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (359 aa)
	C5167_035201	Uncharacterized protein. (596 aa)
	C5167_002503	Uncharacterized protein. (425 aa)
	C5167_042504	Uncharacterized protein. (946 aa)
	C5167_043487	Uncharacterized protein. (179 aa)
	C5167_043902	PITH domain-containing protein. (177 aa)
	C5167_047708	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (411 aa)

Your Current Organism:

Papaver somniferum

NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C5167_015025	C5167_015525	A0A4Y7J5S3	A0A4Y7JAB3	Uncharacterized protein.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.475
C5167_015025	C5167_018512	A0A4Y7J5S3	A0A4Y7IQK8	Uncharacterized protein.	Uncharacterized protein.	0.448
C5167_015025	C5167_019918	A0A4Y7J5S3	A0A4Y7IVG0	Uncharacterized protein.	Uncharacterized protein.	0.708
C5167_015025	C5167_020800	A0A4Y7J5S3	A0A4Y7IY06	Uncharacterized protein.	Uncharacterized protein.	0.455
C5167_015025	C5167_025218	A0A4Y7J5S3	A0A4Y7JUQ8	Uncharacterized protein.	Uncharacterized protein.	0.508
C5167_015025	C5167_032233	A0A4Y7J5S3	A0A4Y7K8C2	Uncharacterized protein.	Uncharacterized protein.	0.508
C5167_015025	C5167_034345	A0A4Y7J5S3	A0A4Y7KGS8	Uncharacterized protein.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.475
C5167_015025	C5167_035201	A0A4Y7J5S3	A0A4Y7KHZ0	Uncharacterized protein.	Uncharacterized protein.	0.730
C5167_015025	C5167_041004	A0A4Y7J5S3	A0A4Y7IKS4	Uncharacterized protein.	Uncharacterized protein.	0.508
C5167_015025	C5167_042504	A0A4Y7J5S3	A0A4Y7L419	Uncharacterized protein.	Uncharacterized protein.	0.625
C5167_015025	C5167_043487	A0A4Y7J5S3	A0A4Y7L8D5	Uncharacterized protein.	Uncharacterized protein.	0.455
C5167_015025	C5167_047708	A0A4Y7J5S3	A0A4Y7LJP8	Uncharacterized protein.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.475
C5167_015525	C5167_015025	A0A4Y7JAB3	A0A4Y7J5S3	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein.	0.475
C5167_015525	C5167_019918	A0A4Y7JAB3	A0A4Y7IVG0	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein.	0.501
C5167_015525	C5167_020717	A0A4Y7JAB3	A0A4Y7IX07	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	PITH domain-containing protein.	0.591
C5167_015525	C5167_035201	A0A4Y7JAB3	A0A4Y7KHZ0	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein.	0.485
C5167_015525	C5167_042504	A0A4Y7JAB3	A0A4Y7L419	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein.	0.448
C5167_015525	C5167_043902	A0A4Y7JAB3	A0A4Y7LA01	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	PITH domain-containing protein.	0.591
C5167_018512	C5167_015025	A0A4Y7IQK8	A0A4Y7J5S3	Uncharacterized protein.	Uncharacterized protein.	0.448
C5167_018512	C5167_035201	A0A4Y7IQK8	A0A4Y7KHZ0	Uncharacterized protein.	Uncharacterized protein.	0.527